RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FYB2Q5VWT5 728 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 SIX6OS1Q8N1H7 587 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 RNF139Q8WU17 664 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 UCMAQ8WVF2 138 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 GTPBP2Q9BX10 602 aaKnown RBP18.65■□□□□ 0.58
PCF11-206ENST00000533018 FBXO10Q9UK96 956 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 PILRBQ9UKJ0 227 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 STON1Q9Y6Q2 735 aa18.65■□□□□ 0.58
PCF11-206ENST00000533018 KMT2BQ9UMN6 2715 aaPredicted RBP18.64■□□□□ 0.57
PCF11-206ENST00000533018 VDRP11473 427 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 HARS2P49590 506 aaKnown RBP18.64■□□□□ 0.57
PCF11-206ENST00000533018 MFAP3P55082 362 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 ARID5AQ03989 594 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 ADIGQ0VDE8 80 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 GEN1Q17RS7 908 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 DUOXA1Q1HG43 343 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 PM20D1Q6GTS8 502 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 KLHL10Q6JEL2 608 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 TMEM270Q6UE05 265 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 ZC3H3Q8IXZ2 948 aaKnown RBP18.64■□□□□ 0.57
PCF11-206ENST00000533018 CEP76Q8TAP6 659 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 EDEM1Q92611 657 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 SLC35C1Q96A29 364 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 P2RY11Q96G91 374 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 METTL14Q9HCE5 456 aaKnown RBP18.64■□□□□ 0.57
PCF11-206ENST00000533018 FSCN3Q9NQT6 498 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 OLA1Q9NTK5 396 aaKnown RBP18.64■□□□□ 0.57
PCF11-206ENST00000533018 SFMBT1Q9UHJ3 866 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 SLC27A6Q9Y2P4 619 aa18.64■□□□□ 0.57
PCF11-206ENST00000533018 SYNCRIPO60506 623 aaKnown RBP18.63■□□□□ 0.57
PCF11-206ENST00000533018 LCP1P13796 627 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 FMO5P49326 533 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 GFPT1Q06210 699 aaPredicted RBP18.63■□□□□ 0.57
PCF11-206ENST00000533018 ZNF252P-AS1Q0IIN9 211 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 SLC23A3Q6PIS1 610 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 ANKS1BQ7Z6G8 1248 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 RGL4Q8IZJ4 473 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 TRIML1Q8N9V2 468 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 SPATA20Q8TB22 786 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 DHTKD1Q96HY7 919 aaPredicted RBP18.63■□□□□ 0.57
PCF11-206ENST00000533018 MRGPRX1Q96LB2 322 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 HSPA12BQ96MM6 686 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 TIGD1Q96MW7 591 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 CIPCQ9C0C6 399 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 KIAA1257Q9ULG3 409 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 SLC6A14Q9UN76 642 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 PCDHB4Q9Y5E5 795 aa18.63■□□□□ 0.57
PCF11-206ENST00000533018 TSPAN3O60637 253 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CEACAM1P13688 526 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 HOXD12P35452 270 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CETN1Q12798 172 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 FOXC1Q12948 553 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 BSPRYQ5W0U4 402 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 RABEPKQ7Z6M1 372 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 PPM1KQ8N3J5 372 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CPXM2Q8N436 756 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 DEFB124Q8NES8 71 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CEP63Q96MT8 703 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 NT5C1BQ96P26 610 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 PRDM16Q9HAZ2 1276 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CD248Q9HCU0 757 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 CD93Q9NPY3 652 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 THAP10Q9P2Z0 257 aaPredicted RBP18.62■□□□□ 0.57
PCF11-206ENST00000533018 CLEC4EQ9ULY5 219 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 FRYQ5TBA9 3013 aa18.62■□□□□ 0.57
PCF11-206ENST00000533018 YJEFN3A6XGL0 299 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 E7ENQ6 273 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 O00370 1275 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 PIK3R2O00459 728 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 NPC1O15118 1278 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 KRT37O76014 449 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 SERPINF2P08697 491 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 SETSIPP0DME0 302 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 IL12RB1P42701 662 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 RGS7P49802 495 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 E2F5Q15329 346 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 FUT11Q495W5 492 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 SYCP2LQ5T4T6 812 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 BHLHA9Q7RTU4 235 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 SLC41A1Q8IVJ1 513 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 HDDC3Q8N4P3 179 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 SORCS1Q8WY21 1168 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 PIWIL1Q96J94 861 aaKnown RBP18.61■□□□□ 0.57
PCF11-206ENST00000533018 SLC32A1Q9H598 525 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 ABCC13Q9NSE7 274 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 ELOVL2Q9NXB9 296 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
PCF11-206ENST00000533018 PAEPP09466 180 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 CD44P16070 742 aaKnown RBP18.6■□□□□ 0.57
PCF11-206ENST00000533018 CSRP1P21291 193 aaKnown RBP18.6■□□□□ 0.57
PCF11-206ENST00000533018 PPP1R2P41236 205 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 SHC2P98077 582 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 ZNF234Q14588 700 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 TRIP4Q15650 581 aaPredicted RBP18.6■□□□□ 0.57
PCF11-206ENST00000533018 MPPE1Q53F39 396 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 PEAR1Q5VY43 1037 aaPredicted RBP18.6■□□□□ 0.57
PCF11-206ENST00000533018 LCLAT1Q6UWP7 414 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms