RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PIGHQ14442 188 aaPredicted RBP15.37■□□□□ 0.05
NXF1-213ENST00000532297 TLR1Q15399 786 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 TCHHL1Q5QJ38 904 aaPredicted RBP15.37■□□□□ 0.05
NXF1-213ENST00000532297 ZCCHC23Q6ZST2 131 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 SLC26A11Q86WA9 606 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 METTL25Q8N6Q8 603 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 UBA3Q8TBC4 463 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 BTBD9Q96Q07 612 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 PEBP4Q96S96 227 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 SHCBP1LQ9BZQ2 653 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 TMEM165Q9HC07 324 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 DDX56Q9NY93 547 aaKnown RBP15.37■□□□□ 0.05
NXF1-213ENST00000532297 PCDHGA4Q9Y5G9 962 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 MAD1L1Q9Y6D9 718 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 TRIP11Q15643 1979 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 NFKBIEO00221 500 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 ADCY3O60266 1144 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
NXF1-213ENST00000532297 PIGRP01833 764 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 CDK4P11802 303 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 PMLP29590 882 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 FDFT1P37268 417 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 COPAP53621 1224 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 IRX4P78413 519 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 TRPC3Q13507 836 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 DENND5BQ6ZUT9 1274 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 ZFP28Q8NHY6 868 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 COPS5Q92905 334 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 CFAP36Q96G28 342 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 APOL6Q9BWW8 343 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 MINDY3Q9H8M7 445 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 INPP5FQ9Y2H2 1132 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 DTNAQ9Y4J8 743 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 ANK1P16157 1881 aa15.37■□□□□ 0.05
NXF1-213ENST00000532297 BTBD19C9JJ37 291 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 STRNO43815 780 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 KRT37O76014 449 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 PGK2P07205 417 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 HNRNPCP07910 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
NXF1-213ENST00000532297 HOXC6P09630 235 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 RPL26P61254 145 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 SFSWAPQ12872 951 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 TNFAIP1Q13829 316 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 STXBP2Q15833 593 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 C15orf59Q2T9L4 293 aaPredicted RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 MAP7D3Q8IWC1 876 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 CEP70Q8NHQ1 597 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 TRPM4Q8TD43 1214 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 XYLT2Q9H1B5 865 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 CDH22Q9UJ99 828 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 POMPQ9Y244 141 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 LSM8O95777 96 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 PRKCBP05771 671 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 ATP5BP06576 529 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 NFICP08651 508 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 SNRPAP09012 282 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 KRT3P12035 628 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 GALK1P51570 392 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 CLCN3P51790 818 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 CDK18Q07002 472 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 NETO2Q8NC67 525 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 SNNO75324 88 aaPredicted RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 STAT5BP51692 787 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 WASHC5Q12768 1159 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 STX3Q13277 289 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 BMPR2Q13873 1038 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 HSDL1Q3SXM5 330 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 HSP90AA5PQ58FG0 334 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 TRNP1Q6NT89 227 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 HPS6Q86YV9 775 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 SNRNP27Q8WVK2 155 aaKnown RBP15.36■□□□□ 0.05
NXF1-213ENST00000532297 MAGEB5Q9BZ81 275 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 UBAP1Q9NZ09 502 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 PCDHGB4Q9UN71 923 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 SORCS3Q9UPU3 1222 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 PCDHGB5Q9Y5G0 923 aa15.36■□□□□ 0.05
NXF1-213ENST00000532297 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 PEX1O43933 1283 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 ZBTB7AO95365 584 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 TOP3BO95985 862 aaKnown RBP15.35■□□□□ 0.05
NXF1-213ENST00000532297 IQCF3P0C7M6 154 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 TAP1Q03518 808 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 SNAPC2Q13487 334 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 MYLK3Q32MK0 819 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 PGM2L1Q6PCE3 622 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 POTEAQ6S8J7 498 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 CATSPERGQ6ZRH7 1159 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 MARVELD2Q8N4S9 558 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 TTC13Q8NBP0 860 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 ACO2Q99798 780 aaKnown RBP15.35■□□□□ 0.05
NXF1-213ENST00000532297 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
NXF1-213ENST00000532297 TIMMDC1Q9NPL8 285 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 TEX264Q9Y6I9 313 aa15.35■□□□□ 0.05
NXF1-213ENST00000532297 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.053e-7■■■■■ 117.6
NXF1-213ENST00000532297 CASQ2O14958 399 aaPredicted RBP15.35■□□□□ 0.05
NXF1-213ENST00000532297 UGT1A9O60656 530 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms