RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CACNB3P54284 484 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 BASP1P80723 227 aaKnown RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 PRKCQQ04759 706 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 PEX6Q13608 980 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 RAB39AQ14964 217 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 ARHGAP44Q17R89 818 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 KLHL38Q2WGJ6 581 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 MGAT5BQ3V5L5 792 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 SLC10A5Q5PT55 438 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 IFIT1BQ5T764 474 aaKnown RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 OTOP3Q7RTS5 596 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 SNX29P2Q8IUI4 249 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 BBOF1Q8ND07 529 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 TFB1MQ8WVM0 346 aaKnown RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 ALKBH8Q96BT7 664 aaKnown RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 CALML4Q96GE6 196 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 ZSCAN10Q96SZ4 725 aaPredicted RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 YME1L1Q96TA2 773 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 DHRS4Q9BTZ2 278 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 EMILIN2Q9BXX0 1053 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 FOXP3Q9BZS1 431 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 GMIPQ9P107 970 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 MARCOQ9UEW3 520 aaPredicted RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 IKBKGQ9Y6K9 419 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 NHSL1Q5SYE7 1610 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 hCG_2039718K7EN88 272 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 EML1O00423 815 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PIAS1O75925 651 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 KRT10P13645 584 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PRKACAP17612 351 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 MAN1A1P33908 653 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PRKCEQ02156 737 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 BST1Q10588 318 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 NRF1Q16656 503 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 KCNK18Q7Z418 384 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 GALNT7Q86SF2 657 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 SLC5A5Q92911 643 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PMEPA1Q969W9 287 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 RILPQ96NA2 401 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 TMEM79Q9BSE2 394 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PLA2G12BQ9BX93 195 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 NYXQ9GZU5 481 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 KCNQ5Q9NR82 932 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 PARVAQ9NVD7 372 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 TMOD3Q9NYL9 352 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 AKAP11Q9UKA4 1901 aa8.02□□□□□ -1.13
PTPRK-219ENST00000531050 COL22A1Q8NFW1 1626 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TRIM64A6NGJ6 449 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF839A8K0R7 811 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 H0YJX3 145 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 POLR1CO15160 346 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 LPXNO60711 386 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 SPAG6O75602 509 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CSPG5O95196 566 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 GSTM1P09488 218 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 KITP10721 976 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 FOSL1P15407 271 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ACAT1P24752 427 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 GPX6P59796 221 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 COPZ1P61923 177 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ECT2LQ008S8 904 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 DPYSQ14117 519 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF846Q147U1 533 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CARTPTQ16568 116 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ABCB5Q2M3G0 1257 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TEX44Q53QW1 395 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 LDLRAP1Q5SW96 308 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 KRT80Q6KB66 452 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF746Q6NUN9 644 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZFP1Q6P2D0 407 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ADGRD1Q6QNK2 874 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 IDO2Q6ZQW0 420 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF354CQ86Y25 554 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TNIP2Q8NFZ5 429 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 RAD54LQ92698 747 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 SH3YL1Q96HL8 342 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 BTBD6Q96KE9 485 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 OSBPL11Q9BXB4 747 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 GPR88Q9GZN0 384 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 NOL6Q9H6R4 1146 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 PLEKHA5Q9HAU0 1116 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 GCNT4Q9P109 453 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 PACSIN3Q9UKS6 424 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 NIP7Q9Y221 180 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 RWDD3Q9Y3V2 267 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 PCDHA2Q9Y5H9 948 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 LRP5O75197 1615 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CLDN25C9JDP6 229 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 F5H6K3 240 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms