RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ANKRD12Q6UB98 2062 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 BDNFP23560 247 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 RANBP1P43487 201 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 MAP3K21Q5TCX8 1036 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 LRRC8EQ6NSJ5 796 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 TRMT10BQ6PF06 316 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 BLOC1S5Q8TDH9 187 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 OMDQ99983 421 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PIF1Q9H611 641 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PLA2G4CQ9UP65 541 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PPEF2O14830 753 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 VAPBO95292 243 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 CD4P01730 458 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 RALBP11234 206 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 MGAT5BQ3V5L5 792 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 KLC3Q6P597 504 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 CXCL17Q6UXB2 119 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 TAS1R3Q7RTX0 852 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 TBCBQ99426 244 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 MAGEB5Q9BZ81 275 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 SNX10Q9Y5X0 201 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 UNC5CO95185 931 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PGK1P00558 417 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 IRF1P10914 325 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 GNAT1P11488 350 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 OLIG2Q13516 323 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 ITPRIPL1Q6GPH6 555 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 DEFB107AQ8IZN7 70 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 CEP70Q8NHQ1 597 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PIWIL1Q96J94 861 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 TXNRD2Q9NNW7 524 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
SCN3B-206ENST00000530277 IPO11Q9UI26 975 aaKnown RBP12.73□□□□□ -0.37
SCN3B-206ENST00000530277 PROCP04070 461 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF143P52747 638 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 OAZ1P54368 228 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 USP4Q13107 963 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 STILQ15468 1287 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 SV2CQ496J9 727 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 MSS51Q4VC12 460 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 RUVBL2Q9Y230 463 aaKnown RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 C15orf41Q9Y2V0 281 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 APOEP02649 317 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 PIRTP0C851 137 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 PTPN4P29074 926 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ARL2P36404 184 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 SATB1Q01826 763 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 AZIN2Q96A70 460 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 APOPT1Q96IL0 206 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ARHGEF38Q9NXL2 777 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 CNTNAP2Q9UHC6 1331 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 LAMB4A4D0S4 1761 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 RNF103-CHMP3A0A140T963 221 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 TPP1O14773 563 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 MCF2P10911 925 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 CPA3P15088 417 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ATP4AP20648 1035 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 LMO2P25791 158 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 PKNOX1P55347 436 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 CSHL1Q14406 222 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 PDK2Q15119 407 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 XYLT1Q86Y38 959 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ABTB1Q969K4 478 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-206ENST00000530277 MROH8Q9H579 483 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 HACD3Q9P035 362 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 TJP1Q07157 1748 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
SCN3B-206ENST00000530277 ALOX15BO15296 676 aa12.71□□□□□ -0.37
SCN3B-206ENST00000530277 SUPT7LO94864 414 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms