RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 SEMA4GQ9NTN9 838 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 KCTD5Q9NXV2 234 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 IL1RAPL1Q9NZN1 696 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 EPS15L1Q9UBC2 864 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 POLG2Q9UHN1 485 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TCEAL9Q9UHQ7 104 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TUBD1Q9UJT1 453 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 MTUS1Q9ULD2 1270 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 INTUQ9ULD6 942 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TTC7AQ9ULT0 858 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 SH3GLB1Q9Y371 365 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 IPPQ9Y573 584 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 BZW2Q9Y6E2 419 aaKnown RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 NUP155O75694 1391 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NEURL4Q96JN8 1562 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ZNF521Q96K83 1311 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ABCC1P33527 1531 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ANKRD26Q9UPS8 1709 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 PPRC1Q5VV67 1664 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 QRICH2Q9H0J4 1663 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 A0A1W2PRQ8 180 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TCRBV7S2A1N4TA0A589 114 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CCDC151A5D8V7 595 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 EFCAB8A8MWE9 144 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HNRNPCL2B2RXH8 293 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 FZD9O00144 591 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MASP2O00187 686 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MAP2K7O14733 419 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 PROM1O43490 865 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MGRN1O60291 552 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SNX2O60749 519 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HNRNPCL1O60812 293 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 SMIM24O75264 130 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NDUFS2O75306 463 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 C1QL1O75973 258 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CAVIN2O95810 425 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SRGNP10124 158 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 FCER1AP12319 257 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CASTP20810 708 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 HSPA1LP34931 641 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CA8P35219 290 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HOXD12P35452 270 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 BLVRAP53004 296 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CACNA2D1P54289 1103 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 PDE1BQ01064 536 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SULT2A1Q06520 285 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TRAP1Q12931 704 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 MRPL28Q13084 256 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 CBX3Q13185 183 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 RAPGEF1Q13905 1077 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 DPYSQ14117 519 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 BRD3Q15059 726 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NONOQ15233 471 aaKnown RBP eCLIP4.27□□□□□ -1.73
CTR9-205ENST00000529898 SAFBQ15424 915 aaKnown RBP eCLIP4.27□□□□□ -1.73
CTR9-205ENST00000529898 SNCBQ16143 134 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 WHAMMP3Q1A5X7 153 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 RABL6Q3YEC7 729 aaPredicted RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 CCDC40Q4G0X9 1142 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SMUG1Q53HV7 270 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CMPK2Q5EBM0 449 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NDUFAF5Q5TEU4 345 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 C8orf74Q6P047 294 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ARHGAP18Q8N392 663 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 DCLK2Q8N568 766 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NGDNQ8NEJ9 315 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 GSDMBQ8TAX9 411 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 DYDC1Q8WWB3 177 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SDCCAG3Q96C92 435 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 RPGRIP1Q96KN7 1286 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MRGPRX4Q96LA9 322 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TRAPPC9Q96Q05 1148 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TESK2Q96S53 571 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 DMRTA2Q96SC8 542 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 CCT7Q99832 543 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 AIFM2Q9BRQ8 373 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 UQCC2Q9BRT2 126 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 SPZ1Q9BXG8 430 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 VPS33BQ9H267 617 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ACTR5Q9H9F9 607 aaPredicted RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 EBF2Q9HAK2 575 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 VCX3AQ9NNX9 186 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 ARFGAP3Q9NP61 516 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 DMAP1Q9NPF5 467 aaPredicted RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 KLC4Q9NSK0 619 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 NDUFA13Q9P0J0 144 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 TESQ9UGI8 421 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 STAP2Q9UGK3 403 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 IP6K2Q9UHH9 426 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 HOOK1Q9UJC3 728 aaKnown RBP4.27□□□□□ -1.73
CTR9-205ENST00000529898 TPCN1Q9ULQ1 816 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MROH1Q8NDA8 1641 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 MAP3K4Q9Y6R4 1608 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms