RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 TCRBV7S3A2A0A539 114 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TBKBP1A7MCY6 615 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM72CH0Y354 149 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 CREB3O43889 395 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TMEM63AO94886 807 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 F9P00740 461 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FGFR3P22607 806 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 SEMA3BQ13214 749 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 SLC45A4Q5BKX6 768 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM182AQ5T1J6 154 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 BEND5Q7L4P6 421 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TAC4Q86UU9 113 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM72BQ86X60 149 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TLCD1Q96CP7 247 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 PGM2Q96G03 612 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 MRPL9Q9BYD2 267 aaKnown RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 PRDM16Q9HAZ2 1276 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 WBP1LQ9NX94 342 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FNDC1Q4ZHG4 1894 aaPredicted RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 MICAL3Q7RTP6 2002 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 MKI67P46013 3256 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 TLDC2A0PJX2 215 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 SMIM23A6NLE4 172 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 GOLGA8MH3BSY2 632 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 GALTP07902 379 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 PBX3P40426 434 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 CXCR3P49682 368 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 BASP1P80723 227 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 IFRD2Q12894 506 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 DPYSQ14117 519 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 FASTKD3Q14CZ7 662 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 ZNF280DQ6N043 979 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 FUT10Q6P4F1 479 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 KCNT2Q6UVM3 1135 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 CROCCP2Q86T23 111 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 CDKL3Q8IVW4 592 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 SCN4BQ8IWT1 228 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 DQX1Q8TE96 717 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 DIS3LQ8TF46 1054 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 OLFM3Q96PB7 478 aa15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 ROPN1BQ9BZX4 212 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 ROPN1Q9HAT0 212 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-213ENST00000529611 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.158e-6■■■■■ 107
CCDC90B-213ENST00000529611 NT5C1B-RDH14C9J2C7 533 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 EEF2KO00418 725 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 RASGRF2O14827 1237 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 MFSD11O43934 449 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SHOX2O60902 331 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 IGLV3-25P01717 112 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 ACTN2P35609 894 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SLCO1A2P46721 670 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 PGFP49763 221 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 ATP1A2P50993 1020 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 YWHAGP61981 247 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 HIF1AQ16665 826 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 C6orf118Q5T5N4 469 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 C1orf53Q5VUE5 145 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 VSTM1Q6UX27 236 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 RFX8Q6ZV50 586 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 PGLYRP2Q96PD5 576 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 TMEM175Q9BSA9 504 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 TRIM62Q9BVG3 475 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 PHACTR1Q9C0D0 580 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 PAK5Q9P286 719 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 TBX21Q9UL17 535 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 PCDHB5Q9Y5E4 795 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 OR6C75A6NL08 312 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SMAPO00193 183 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 ALOX15BO15296 676 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 DGKIO75912 1065 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 CAPN2P17655 700 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 HPDP32754 393 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 GPR15P49685 360 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 MAGOHP61326 146 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 EIF4EBP2Q13542 120 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 KCNJ11Q14654 390 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 DDR2Q16832 855 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 LONRF1Q17RB8 773 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 ARL13BQ3SXY8 428 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SDHAF4Q5VUM1 108 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 CENPUQ71F23 418 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 SCD5Q86SK9 330 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 STKLD1Q8NE28 680 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 C8orf48Q96LL4 319 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 WDCPQ9H6R7 721 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 ABCC13Q9NSE7 274 aa15.98■□□□□ 0.15
CCDC90B-213ENST00000529611 DCLK1O15075 740 aa15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 RGS16O15492 202 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 BANF1O75531 89 aa15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 ABHD2P08910 425 aa15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 MAGEA11P43364 429 aa15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 PDIA2Q13087 525 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-213ENST00000529611 AUHQ13825 339 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms