RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
COPB1-206ENST00000529210 BECN2A8MW95 431 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 MED7O43513 233 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 LTFP02788 710 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 C7P10643 843 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 SLC9A1P19634 815 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 PON1P27169 355 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
COPB1-206ENST00000529210 LIMK1P53667 647 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
COPB1-206ENST00000529210 ELF2Q15723 593 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
COPB1-206ENST00000529210 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 RBM43Q6ZSC3 357 aaKnown RBP12.59□□□□□ -0.39
COPB1-206ENST00000529210 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 DENND1CQ8IV53 801 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 FAM114A1Q8IWE2 563 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 RNF139Q8WU17 664 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 ZNF606Q8WXB4 792 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
COPB1-206ENST00000529210 RTKNQ9BST9 563 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
COPB1-206ENST00000529210 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
COPB1-206ENST00000529210 ABCA7Q8IZY2 2146 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 A0A1W2PQF6 199 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
COPB1-206ENST00000529210 CYBBP04839 570 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 FYNP06241 537 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 LCP1P13796 627 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 RGS7P49802 495 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 EIF4HQ15056 248 aaKnown RBP12.58□□□□□ -0.4
COPB1-206ENST00000529210 MPP7Q5T2T1 576 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 ADGRF1Q5T601 910 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 EGFLAMQ63HQ2 1017 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 NUGGCQ68CJ6 796 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 UNC45BQ8IWX7 931 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.58□□□□□ -0.4
COPB1-206ENST00000529210 EDEM1Q92611 657 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 NUP205Q92621 2012 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 SIX2Q9NPC8 291 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 VPS45Q9NRW7 570 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 PLK2Q9NYY3 685 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 PCDHGC3Q9UN70 934 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.58□□□□□ -0.4
COPB1-206ENST00000529210 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.4
COPB1-206ENST00000529210 LAMA1P25391 3075 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 SLC30A4O14863 429 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 DCLK1O15075 740 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 IRAK2O43187 625 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 HMBSP08397 361 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 KRT5P13647 590 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 HOXB2P14652 356 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 HOXD9P28356 352 aaPredicted RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 GNA15P30679 374 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 MPLP40238 635 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 MTIF2P46199 727 aaKnown RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 ATXN1P54253 815 aaKnown RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 EIF4EBP2Q13542 120 aaPredicted RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 MPPE1Q53F39 396 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 MIIPQ5JXC2 388 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 KIAA0907Q7Z7F0 614 aaPredicted RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 GOLGA1Q92805 767 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 SERPINB11Q96P15 392 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 TPSD1Q9BZJ3 242 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 LHX5Q9H2C1 402 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
COPB1-206ENST00000529210 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 CKAP5Q14008 2032 aa12.57□□□□□ -0.4
COPB1-206ENST00000529210 TCRBV21S2A2A0A5A6 115 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 PAPSS1O43252 624 aaPredicted RBP12.56□□□□□ -0.4
COPB1-206ENST00000529210 TIMM44O43615 452 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
COPB1-206ENST00000529210 CALCAP01258 141 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 IGLV3-25P01717 112 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 GLI1P08151 1106 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 GABRG2P18507 467 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
COPB1-206ENST00000529210 GEN1Q17RS7 908 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 VWA3BQ502W6 1294 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 SDE2Q6IQ49 451 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 DENND1BQ6P3S1 775 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 DGLUCYQ7Z3D6 616 aa12.56□□□□□ -0.4
COPB1-206ENST00000529210 ANKS1BQ7Z6G8 1248 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms