RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 OTUB2Q96DC9 234 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 ARHGEF26Q96DR7 871 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
UBXN1-209ENST00000528907 LRRC3BQ96PB8 259 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 MCEEQ96PE7 176 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 PACSIN1Q9BY11 444 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 IRX2Q9BZI1 471 aaPredicted RBP15□□□□□ -0.01
UBXN1-209ENST00000528907 SMG9Q9H0W8 520 aaKnown RBP15□□□□□ -0.01
UBXN1-209ENST00000528907 TRPV5Q9NQA5 729 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15□□□□□ -0.01
UBXN1-209ENST00000528907 STOML2Q9UJZ1 356 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 ZNF510Q9Y2H8 683 aa15□□□□□ -0.01
UBXN1-209ENST00000528907 REXO2Q9Y3B8 237 aaKnown RBP15□□□□□ -0.01
UBXN1-209ENST00000528907 A0A0A6YYK5 440 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 SLC12A8A0AV02 714 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 FAM170AA1A519 330 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 CHADO15335 359 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 ATMINO43313 823 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 SLC2A3P11169 496 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 CXCR3P49682 368 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 TBX4P57082 545 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 RNASE9P60153 205 aaKnown RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 PITX1P78337 314 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 BRMS1LQ5PSV4 323 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 Q6ZNB5 142 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 PHLDB2Q86SQ0 1253 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 MIB1Q86YT6 1006 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 UNC45BQ8IWX7 931 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 FAM217AQ8IXS0 508 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 SLC44A3Q8N4M1 653 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 NIPA2Q8N8Q9 360 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 RFFLQ8WZ73 363 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 FCRL2Q96LA5 508 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 CFAP57Q96MR6 1250 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 CNPY3Q9BT09 278 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 PLA2G2FQ9BZM2 168 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 GKN1Q9NS71 199 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 THG1LQ9NWX6 298 aaKnown RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 TBC1D14Q9P2M4 693 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 MYO1AQ9UBC5 1043 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 LSM7Q9UK45 103 aaKnown RBP14.99□□□□□ -0.01
UBXN1-209ENST00000528907 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 COL4A2P08572 1712 aa14.99□□□□□ -0.01
UBXN1-209ENST00000528907 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 KCNU1A8MYU2 1149 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 M0QYT0 321 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 SLC9A3R1O14745 358 aaPredicted RBP14.98□□□□□ -0.01
UBXN1-209ENST00000528907 GJB6O95452 261 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 DESP17661 470 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 SP100P23497 879 aaPredicted RBP14.98□□□□□ -0.01
UBXN1-209ENST00000528907 RDXP35241 583 aaKnown RBP14.98□□□□□ -0.01
UBXN1-209ENST00000528907 SULT1E1P49888 294 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 VAV2P52735 878 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 OGDHQ02218 1023 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 ACBD5Q5T8D3 534 aaPredicted RBP14.98□□□□□ -0.01
UBXN1-209ENST00000528907 ZNF662Q6ZS27 426 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 OSCP1Q8WVF1 389 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 TBCBQ99426 244 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 FAM83CQ9BQN1 747 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 RPP25Q9BUL9 199 aaKnown RBP14.98□□□□□ -0.01
UBXN1-209ENST00000528907 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 ADAM33Q9BZ11 813 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 FAM204AQ9H8W3 233 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 DDIT4Q9NX09 232 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 SMPD4Q9NXE4 827 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 ARHGEF38Q9NXL2 777 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 CALCOCO1Q9P1Z2 691 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 CFAP97Q9P2B7 532 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 SH3BP1Q9Y3L3 701 aa14.98□□□□□ -0.01
UBXN1-209ENST00000528907 ARNTLO00327 626 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 CCP110O43303 1012 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 MSI1O43347 362 aaKnown RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 KLKB1P03952 638 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 TFE3P19532 575 aaPredicted RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 CCR1P32246 355 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 ARHGAP25P42331 645 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 HARS2P49590 506 aaKnown RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 AIF1P55008 147 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 DEUP1Q05D60 604 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 TDGQ13569 410 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 PIGHQ14442 188 aaPredicted RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 PDGFRLQ15198 375 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 SND1Q7KZF4 910 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 GJD3Q8N144 294 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 CPXM2Q8N436 756 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 SLC35G2Q8TBE7 412 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 ZNF564Q8TBZ8 553 aaPredicted RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 KXD1Q9BQD3 176 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 TRMT61BQ9BVS5 477 aaKnown RBP14.97□□□□□ -0.01
UBXN1-209ENST00000528907 SLC2A4RGQ9NR83 387 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 PIGVQ9NUD9 493 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 IP6K2Q9UHH9 426 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 ADGRG1Q9Y653 693 aa14.97□□□□□ -0.01
UBXN1-209ENST00000528907 GFRA2O00451 464 aa14.96□□□□□ -0.01
UBXN1-209ENST00000528907 CORO1AP31146 461 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms