RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 THAP10Q9P2Z0 257 aaPredicted RBP16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 SFMBT1Q9UHJ3 866 aa16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 TSPAN16Q9UKR8 245 aa16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 WASF3Q9UPY6 502 aa16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 SLC27A6Q9Y2P4 619 aa16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.2
CLNS1A-210ENST00000528364 C1QTNF9BB2RNN3 333 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 GFRA2O00451 464 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 TSPAN3O60637 253 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 ZNF217O75362 1048 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 GABBR2O75899 941 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 CALCAP01258 141 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 SERPINF2P08697 491 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 C1QTNF9P0C862 333 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 FUT11Q495W5 492 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 TMEM215Q68D42 235 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 ARHGAP18Q8N392 663 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 UBR7Q8N806 425 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 TSG101Q99816 390 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 MKRN2Q9H000 416 aaKnown RBP16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 STRIP2Q9ULQ0 834 aa16.26■□□□□ 0.19
CLNS1A-210ENST00000528364 SPAARA0A1B0GVQ0 90 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 E7ENQ6 273 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 SLC16A3O15427 465 aaKnown RBP16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 NDUFS2O75306 463 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 FKBP3Q00688 224 aaKnown RBP16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 SGO2Q562F6 1265 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 CEP76Q8TAP6 659 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 TFAP2BQ92481 460 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 SLC35C1Q96A29 364 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 ZNF419Q96HQ0 510 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 ZSWIM1Q9BR11 485 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 LRRC4Q9HBW1 653 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 RMND1Q9NWS8 449 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
CLNS1A-210ENST00000528364 KCNJ18B7U540 433 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 RNF225M0QZC1 329 aaPredicted RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 PIK3R2O00459 728 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 XPO1O14980 1071 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 LCP1P13796 627 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 DPP6P42658 865 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 RGS7P49802 495 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 SLC8A3P57103 927 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 FAM193AP78312 1265 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 SEMA3BQ13214 749 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 ENPP2Q13822 863 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 ZNF234Q14588 700 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 TRIP4Q15650 581 aaPredicted RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 PIP4P1Q86T03 277 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 RGL4Q8IZJ4 473 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 SPATA20Q8TB22 786 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 KAT5Q92993 513 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 TOE1Q96GM8 510 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 PRDM16Q9HAZ2 1276 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 ARMCX3Q9UH62 379 aaPredicted RBP16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 NUMA1Q14980 2115 aa16.24■□□□□ 0.19
CLNS1A-210ENST00000528364 IGF2RP11717 2491 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 O00370 1275 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 ARHGAP33O14559 1287 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 CYBBP04839 570 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 VDRP11473 427 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 HLA-EP13747 358 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 PRKCHP24723 683 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 CD6P30203 668 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 HOXD12P35452 270 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 ATXN3P54252 364 aaPredicted RBP16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 BCAT1P54687 386 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 BST2Q10589 180 aaKnown RBP16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 STARD3Q14849 445 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 TMPRSS6Q8IU80 811 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 FAM217AQ8IXS0 508 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 MINDY1Q8N5J2 469 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 UCMAQ8WVF2 138 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 PLD4Q96BZ4 506 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 IPO9Q96P70 1041 aaKnown RBP16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 SCNM1Q9BWG6 230 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 GPR174Q9BXC1 333 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 CIPCQ9C0C6 399 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 ITM2CQ9NQX7 267 aa16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 WSB2Q9NYS7 404 aaPredicted RBP16.23■□□□□ 0.19
CLNS1A-210ENST00000528364 PCDH15Q96QU1 1955 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms