RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RING1Q06587 406 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 PPM1JQ5JR12 505 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 C10orf76Q5T2E6 689 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 ADGRF1Q5T601 910 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 NUGGCQ68CJ6 796 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 MSANTD2Q6P1R3 559 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 TRIM65Q6PJ69 517 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 C12orf40Q86WS4 652 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 DENND1CQ8IV53 801 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 ARHGEF19Q8IW93 802 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 PHTF2Q8N3S3 785 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 ALLCQ8N6M5 410 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 ZNF513Q8N8E2 541 aaPredicted RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 ZNF606Q8WXB4 792 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 WBP2Q969T9 261 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 SPACA7Q96KW9 195 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 NOX5Q96PH1 765 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 TUBGCP2Q9BSJ2 902 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 SEMA4GQ9NTN9 838 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 STOML2Q9UJZ1 356 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 AGO1Q9UL18 857 aaKnown RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 TULP2O00295 520 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 IRAK2O43187 625 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 MAP3K13O43283 966 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 THAP12O43422 761 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 ZNF217O75362 1048 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 LETM1O95202 739 aaPredicted RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 LTFP02788 710 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 CISD3P0C7P0 127 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 ZNF806P0C7X5 589 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 SLC9A1P19634 815 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 BRD2P25440 801 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 EEF1GP26641 437 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 PON1P27169 355 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 GNA15P30679 374 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 USP8P40818 1118 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 RGS7P49802 495 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 SPEM2Q0P670 501 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 MTA1Q13330 715 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 EIF4HQ15056 248 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 LPAL2Q16609 132 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 PLK5Q496M5 336 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 MPP7Q5T2T1 576 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 EMC10Q5UCC4 262 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 ANO7Q6IWH7 933 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 SLC36A4Q6YBV0 504 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 TMEM110Q86TL2 294 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 KBTBD6Q86V97 674 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 CCDC117Q8IWD4 279 aaPredicted RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 FAM217AQ8IXS0 508 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 CHPFQ8IZ52 775 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 DDI1Q8WTU0 396 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 DDX1Q92499 740 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 EDEM1Q92611 657 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 KAT5Q92993 513 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 CRACR2AQ9BSW2 395 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 LHX5Q9H2C1 402 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 NDST4Q9H3R1 872 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 ST7Q9NRC1 585 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 VPS45Q9NRW7 570 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 LMBRD1Q9NUN5 540 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 BCCIPQ9P287 314 aaKnown RBP eCLIP10.02□□□□□ -0.81
CHD7-208ENST00000528280 SLC12A6Q9UHW9 1150 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 GCN1Q92616 2671 aaKnown RBP10.02□□□□□ -0.81
CHD7-208ENST00000528280 ATG2BQ96BY7 2078 aa10.02□□□□□ -0.81
CHD7-208ENST00000528280 TYW5A2RUC4 315 aaKnown RBP10.01□□□□□ -0.81
CHD7-208ENST00000528280 SGK1O00141 431 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 CAPN9O14815 690 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 EPN2O95208 641 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 GLI1P08151 1106 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 NCAM1P13591 858 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 GBP1P32455 592 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 KRT9P35527 623 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 ARID5AQ03989 594 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 NNTQ13423 1086 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 STARD3Q14849 445 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 ARHGAP44Q17R89 818 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 EFHC1Q5JVL4 640 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 FYB2Q5VWT5 728 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 SASS6Q6UVJ0 657 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 TMEM92Q6UXU6 159 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 LPCAT2Q7L5N7 544 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 BHLHA9Q7RTU4 235 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 OLIG1Q8TAK6 271 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 ENOX1Q8TC92 643 aaKnown RBP10.01□□□□□ -0.81
CHD7-208ENST00000528280 NETO1Q8TDF5 533 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 SHC3Q92529 594 aa10.01□□□□□ -0.81
CHD7-208ENST00000528280 NDRG1Q92597 394 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms