RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 MPZL3Q6UWV2 235 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 APBB1IPQ7Z5R6 666 aaPredicted RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 TMEM120AQ9BXJ8 343 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 TRIM55Q9BYV6 548 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 ZNF518BQ9C0D4 1074 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 CXCL16Q9H2A7 254 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 PCSK1NQ9UHG2 260 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 RPL26L1Q9UNX3 145 aaKnown RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 EFR3BQ9Y2G0 817 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 HES2Q9Y543 173 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 CDH23Q9H251 3354 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 TCRBV9S1A1TA0A576 114 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 DPPA5A6NC42 116 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 MEIS3P2A8K0S8 358 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 E5RJQ4 531 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 NDC80O14777 642 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 GSC2O15499 205 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 LPXNO60711 386 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 PDHA1P08559 390 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 DLDP09622 509 aaKnown RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 AXLP30530 894 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 PCK1P35558 622 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 PRKD1Q15139 912 aaPredicted RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 KBTBD12Q3ZCT8 623 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 RINLQ6ZS11 566 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 SMG8Q8ND04 991 aaKnown RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 NRG4Q8WWG1 115 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 DCLRE1BQ9H816 532 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 SIGLEC16A6NMB1 481 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 CCDC22O60826 627 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 AVILO75366 819 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 KRT36O76013 467 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 NPTXRO95502 500 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 MT-ND3P03897 115 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ACRP10323 421 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ARFIP2P53365 341 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 SESN3P58005 492 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ORC1Q13415 861 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 DPYSL3Q14195 570 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 KPNB1Q14974 876 aaKnown RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 CMPK2Q5EBM0 449 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ACSBG2Q5FVE4 666 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 SLC27A1Q6PCB7 646 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 TEX9Q8N6V9 391 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 DPF3Q92784 378 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 TTC17Q96AE7 1141 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ALKBH8Q96BT7 664 aaKnown RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 CPXM1Q96SM3 734 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 XYLT2Q9H1B5 865 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 NXF3Q9H4D5 531 aaKnown RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 NMRK1Q9NWW6 199 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 POLIQ9UNA4 740 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 MAP3K13O43283 966 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 DNAJC6O75061 913 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 FAM155BO75949 473 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 KRT7P08729 469 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 PYGBP11216 843 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 EIF3EP60228 445 aaKnown RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 CDK16Q00536 496 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 CHSY1Q86X52 802 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 RFX6Q8HWS3 928 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 DNAJC9Q8WXX5 260 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 NSL1Q96IY1 281 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 CYTH2Q99418 400 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 ADAM2Q99965 735 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
RBM39-243ENST00000528062 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
RBM39-243ENST00000528062 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
RBM39-243ENST00000528062 HNRNPCL1O60812 293 aaKnown RBP13.47□□□□□ -0.25
RBM39-243ENST00000528062 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
RBM39-243ENST00000528062 ERBB2P04626 1255 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 RBP3P10745 1247 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 ACADSP16219 412 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 RFC2P35250 354 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 PEX19P40855 299 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
RBM39-243ENST00000528062 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
RBM39-243ENST00000528062 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 RCN1Q15293 331 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 SGSM1Q2NKQ1 1148 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 RAB6CQ53S08 254 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 SLC44A1Q8WWI5 657 aa13.47□□□□□ -0.25
RBM39-243ENST00000528062 HSPH1Q92598 858 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms