RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 PPP1R10Q96QC0 940 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 EBNA1BP2Q99848 306 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 FERMT1Q9BQL6 677 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MYLK2Q9H1R3 596 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MKS1Q9NXB0 559 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SLC17A7Q9P2U7 560 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 H3BRJ5 948 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 IGF2BP3O00425 579 aaKnown RBP eCLIP15.87■□□□□ 0.13
USH1C-207ENST00000527720 GABRDO14764 452 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 CELF2O95319 508 aaKnown RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 GOT1P17174 413 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 PTPN1P18031 435 aaKnown RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 TWF2Q6IBS0 349 aaKnown RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 PPM1NQ8N819 430 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 ARRDC4Q8NCT1 418 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 NPY6RQ99463 290 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 SLC38A7Q9NVC3 462 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 CHKBQ9Y259 395 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 A0A0A0MRY4 1105 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 CYB561D2O14569 222 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 PTGESO14684 152 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 KRT38O76015 456 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 STK10O94804 968 aaKnown RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 PYGBP11216 843 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 AMPD1P23109 780 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 AIF1P55008 147 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 UNC5AQ6ZN44 842 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 CTAGE3PQ8IX95 158 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 FAM149B1Q96BN6 582 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 SPATA13Q96N96 652 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 SLC2A13Q96QE2 648 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 KLF6Q99612 283 aaPredicted RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 PLAC1Q9HBJ0 212 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 EIF2B3Q9NR50 452 aaKnown RBP15.87■□□□□ 0.13
USH1C-207ENST00000527720 ARHGEF4Q9NR80 690 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
USH1C-207ENST00000527720 FAM159BA6NKW6 160 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 KLF11O14901 512 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 TGDSO95455 350 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 GLUD2P49448 558 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 SERPINB9P50453 376 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 KCNJ2P63252 427 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 FAM131BQ86XD5 332 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 ERP27Q96DN0 273 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 SLC9A7Q96T83 725 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 IQCGQ9H095 443 aaKnown RBP15.86■□□□□ 0.13
USH1C-207ENST00000527720 LRRC4Q9HBW1 653 aa15.86■□□□□ 0.13
USH1C-207ENST00000527720 TRIM49D1C9J1S8 452 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 COPEO14579 308 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 OPHN1O60890 802 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 FBXO21O94952 628 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 CCNFP41002 786 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 PURAQ00577 322 aaKnown RBP15.85■□□□□ 0.13
USH1C-207ENST00000527720 DCAF6Q58WW2 860 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 ANKRD20A2Q5SQ80 823 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 ANKRD20A1Q5TYW2 823 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 ANKRD20A3Q5VUR7 823 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 CLEC20AQ6ZU45 233 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 PAQR9Q6ZVX9 377 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 FAM228AQ86W67 206 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 SIX6OS1Q8N1H7 587 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 TMEM86AQ8N2M4 240 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 RAB3IPQ96QF0 476 aaPredicted RBP15.85■□□□□ 0.13
USH1C-207ENST00000527720 TSSK1BQ9BXA7 367 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 NOD2Q9HC29 1040 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 KPNA6O60684 536 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 CNTFP26441 200 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 RGS2P41220 211 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 BEX3Q00994 111 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 PRKD1Q15139 912 aaPredicted RBP15.85■□□□□ 0.13
USH1C-207ENST00000527720 FSCN1Q16658 493 aaKnown RBP15.85■□□□□ 0.13
USH1C-207ENST00000527720 OTUD1Q5VV17 481 aaPredicted RBP15.85■□□□□ 0.13
USH1C-207ENST00000527720 CCNJLQ8IV13 435 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 TRIM42Q8IWZ5 723 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 RNF139Q8WU17 664 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 INPP5DQ92835 1189 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 WNT8BQ93098 351 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 FAM111AQ96PZ2 611 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 TRIM55Q9BYV6 548 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 MAGEB5Q9BZ81 275 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 CD248Q9HCU0 757 aa15.85■□□□□ 0.13
USH1C-207ENST00000527720 WDR91A4D1P6 747 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 CXorf49A8MYA2 514 aaPredicted RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 M0QZ92 97 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 IGHA2P01877 340 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 FAM200BP0CF97 657 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 VAV1P15498 845 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 LHX1P48742 406 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 RASSF2P50749 326 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 PAFAH1B3Q15102 231 aaKnown RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 PDK1Q15118 436 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 PARP6Q2NL67 630 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 STEAP4Q687X5 459 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 PYROXD2Q8N2H3 581 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 SRPK1Q96SB4 655 aaKnown RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 LRMDAQ9H2I8 198 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms