RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 FMR1NBQ8N0W7 255 aaPredicted RBP23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 RNF139Q8WU17 664 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 SMARCE1Q969G3 411 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 HSPA12BQ96MM6 686 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 ULBP1Q9BZM6 244 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 TSPAN16Q9UKR8 245 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 TNRC6BQ9UPQ9 1833 aaKnown RBP23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 SLC16A3O15427 465 aaKnown RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 SYNCRIPO60506 623 aaKnown RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 HARS2P49590 506 aaKnown RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 BCAT1P54687 386 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 ARID5AQ03989 594 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 GEN1Q17RS7 908 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 SYCP2LQ5T4T6 812 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 UBA3Q8TBC4 463 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 PRDM16Q9HAZ2 1276 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 CD248Q9HCU0 757 aa23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 ARMCX3Q9UH62 379 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 HOOK1Q9UJC3 728 aaKnown RBP23.43■■□□□ 1.34
TRAPPC4-208ENST00000527680 TULP2O00295 520 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 XPO1O14980 1071 aaKnown RBP23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 NPC1O15118 1278 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 E2F5Q15329 346 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 PEAR1Q5VY43 1037 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 PM20D1Q6GTS8 502 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 FMNL3Q8IVF7 1028 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 SLC41A1Q8IVJ1 513 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 PLD4Q96BZ4 506 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 P2RY11Q96G91 374 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 CIPCQ9C0C6 399 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 OLA1Q9NTK5 396 aaKnown RBP23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 THAP10Q9P2Z0 257 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 COQ4Q9Y3A0 265 aa23.42■■□□□ 1.34
TRAPPC4-208ENST00000527680 PCNX2A6NKB5 2137 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 OPHN1O60890 802 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 SYPP08247 313 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 SPINK2P20155 84 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 PMS1P54277 932 aaKnown RBP23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 BST2Q10589 180 aaKnown RBP23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 FUT11Q495W5 492 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 ANKS1BQ7Z6G8 1248 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 SIX6OS1Q8N1H7 587 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 CPXM2Q8N436 756 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 EDEM1Q92611 657 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 FOXJ1Q92949 421 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 ZNF419Q96HQ0 510 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 CD93Q9NPY3 652 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 ELOVL2Q9NXB9 296 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 SFMBT1Q9UHJ3 866 aa23.41■■□□□ 1.34
TRAPPC4-208ENST00000527680 TRIM49BA6NDI0 452 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 ARHGAP33O14559 1287 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 TSPAN3O60637 253 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 VDRP11473 427 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 GNSP15586 552 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 TBXAS1P24557 533 aaPredicted RBP23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 CD6P30203 668 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 IL12RB1P42701 662 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 ZNF132P52740 706 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 LRRC63Q05C16 580 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 ADIGQ0VDE8 80 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 STIM1Q13586 685 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 PLEKHG6Q3KR16 790 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 WDR45BQ5MNZ6 344 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 BSPRYQ5W0U4 402 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 ISM2Q6H9L7 571 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 PIWIL1Q96J94 861 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 SLC2A11Q9BYW1 496 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 GTPBP4Q9BZE4 634 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 CAPN10Q9HC96 672 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 KIAA1257Q9ULG3 409 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 CLEC4EQ9ULY5 219 aa23.4■■□□□ 1.34
TRAPPC4-208ENST00000527680 TIMM44O43615 452 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 LCP1P13796 627 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 MAOBP27338 520 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 MPPE1Q53F39 396 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 COBLL1Q53SF7 1204 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 TMPRSS6Q8IU80 811 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 MINDY1Q8N5J2 469 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 SIPA1Q96FS4 1042 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 METTL14Q9HCE5 456 aaKnown RBP23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 SUSD2Q9UGT4 822 aa23.39■■□□□ 1.33
TRAPPC4-208ENST00000527680 KMT2BQ9UMN6 2715 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 PSMA7O14818 248 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 TOP3BO95985 862 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 ACADMP11310 421 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 SEMA3BQ13214 749 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 ZNF234Q14588 700 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 TRIP4Q15650 581 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 CCDC40Q4G0X9 1142 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 TMEM270Q6UE05 265 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 OR2I1PQ8NGU4 316 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 SORCS1Q8WY21 1168 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 PRCCQ92733 491 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 SLC35C1Q96A29 364 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 TMA16Q96EY4 203 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 TOE1Q96GM8 510 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 GPR174Q9BXC1 333 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 MKRN2Q9H000 416 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 ITM2CQ9NQX7 267 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms