RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 EBF1Q9UH73 591 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 STOML2Q9UJZ1 356 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 RAB23Q9ULC3 237 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 STARD13Q9Y3M8 1113 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 KLF8O95600 359 aaPredicted RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 CISD3P0C7P0 127 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 COPB1P53618 953 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 RING1Q06587 406 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 SIM2Q14190 667 aaPredicted RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 CRY1Q16526 586 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 CAVIN1Q6NZI2 390 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 TRMT11Q7Z4G4 463 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 PASD1Q8IV76 773 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 UNC45BQ8IWX7 931 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 TXNDC5Q8NBS9 432 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 P2RY11Q96G91 374 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 PPP1R13BQ96KQ4 1090 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 NAALADL1Q9UQQ1 740 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 CEP83Q9Y592 693 aa27.48■■□□□ 1.99
TSPAN4-217ENST00000527644 LRRC10BA6NIK2 292 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 CAPN9O14815 690 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 AXIN1O15169 862 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 IGLV3-27P01718 113 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 CDK11BP21127 795 aaKnown RBP27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 DGKEP52429 567 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 TBX4P57082 545 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 SNX16P57768 344 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 ZNF445P59923 1031 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 YWHAZP63104 245 aaKnown RBP27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 NCAPHQ15003 741 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 EOGTQ5NDL2 527 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 ADGRF1Q5T601 910 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 NUGGCQ68CJ6 796 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 TSTD1Q8NFU3 115 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 DQX1Q8TE96 717 aaKnown RBP27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 SERPINB11Q96P15 392 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 CPXM1Q96SM3 734 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 HINFPQ9BQA5 517 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 POPDC2Q9HBU9 364 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 ZNF292O60281 2723 aa27.47■■□□□ 1.99
TSPAN4-217ENST00000527644 CYP11B1P15538 503 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 ZNF18P17022 549 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 SRSF5Q13243 272 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 NNTQ13423 1086 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 PRR23BQ6ZRT6 265 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 TOGARAM2Q6ZUX3 1019 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 ZNF513Q8N8E2 541 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 C1orf131Q8NDD1 294 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 DDI1Q8WTU0 396 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 GAB3Q8WWW8 586 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 GANQ9H2C0 597 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 NCDNQ9UBB6 729 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 SLC27A6Q9Y2P4 619 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 DAAM1Q9Y4D1 1078 aa27.46■■□□□ 1.99
TSPAN4-217ENST00000527644 F8VZ95 297 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 SGK1O00141 431 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 ANO6Q4KMQ2 910 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 MPPE1Q53F39 396 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 CEP68Q76N32 757 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 AZIN2Q96A70 460 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 PDCL3Q9H2J4 239 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 ASNSD1Q9NWL6 643 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 TJP2Q9UDY2 1190 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 TLR6Q9Y2C9 796 aa27.45■■□□□ 1.98
TSPAN4-217ENST00000527644 LGALS16A8MUM7 142 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 RPP40O75818 363 aaKnown RBP27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 GLI1P08151 1106 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 SLC11A2P49281 568 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 KLK7P49862 253 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 EFHC1Q5JVL4 640 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 SYPL2Q5VXT5 272 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 LAIR1Q6GTX8 287 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 TMEM92Q6UXU6 159 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 AOPEPQ8N6M6 819 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 BPIFA3Q9BQP9 254 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 SLC2A11Q9BYW1 496 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 IRX2Q9BZI1 471 aaPredicted RBP27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 HSD3B7Q9H2F3 369 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 HCN2Q9UL51 889 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 SIK3Q9Y2K2 1263 aa27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 MYO18AQ92614 2054 aaKnown RBP27.44■■□□□ 1.98
TSPAN4-217ENST00000527644 PRRT4C9JH25 899 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 GFRA2O00451 464 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 ADAM23O75077 832 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 ALDH1A2O94788 518 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 POLR2FP61218 127 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 RASSF3Q86WH2 238 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 TMEM35BQ8NCS4 154 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 TMA16Q96EY4 203 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 FCRL2Q96LA5 508 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 POLMQ9NP87 494 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 ZDHHC4Q9NPG8 344 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 FAM207AQ9NSI2 230 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 GMEB2Q9UKD1 530 aa27.43■■□□□ 1.98
TSPAN4-217ENST00000527644 ACSL4O60488 711 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 NTSR1P30989 418 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 CDH5P33151 784 aaPredicted RBP27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 TAF5Q15542 800 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 LPAL2Q16609 132 aa27.42■■□□□ 1.98
TSPAN4-217ENST00000527644 TAC4Q86UU9 113 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms