RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PLA2G4CQ9UP65 541 aa12.93□□□□□ -0.34
CAPN1-208ENST00000527323 HBS1LQ9Y450 684 aaKnown RBP12.93□□□□□ -0.34
CAPN1-208ENST00000527323 TOP3BO95985 862 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 APOEP02649 317 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 BPGMP07738 259 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SERPINA6P08185 405 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 BCAR1P56945 870 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 C16orf46Q6P387 395 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 UBA3Q8TBC4 463 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 DEPDC1BQ8WUY9 529 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ANKRD36BP1Q96IX9 119 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 CYP4F11Q9HBI6 524 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SMYD2Q9NRG4 433 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 KLHL33A6NCF5 533 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 M0QYV0 167 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TXNDC9O14530 226 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 FKBP6O75344 327 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 CSH1P0DML2 217 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 CSH2P0DML3 217 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 OAZ1P54368 228 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 C15orf59Q2T9L4 293 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 RAB6CQ53S08 254 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ZNF667Q5HYK9 610 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 PEBP4Q96S96 227 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 CENPKQ9BS16 269 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 RAB6CQ9H0N0 254 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 LHX5Q9H2C1 402 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 NRBP2Q9NSY0 501 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ZNF180Q9UJW8 692 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SCN4AP35499 1836 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 OGTO15294 1046 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 LGR5O75473 907 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 LYPLA1O75608 230 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ATG7O95352 703 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 SERPINB6P35237 376 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ASPAP45381 313 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TBCCQ15814 346 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 FASTKD1Q53R41 847 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TRMT10BQ6PF06 316 aaKnown RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 RAPH1Q70E73 1250 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 ST13P4Q8IZP2 240 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-208ENST00000527323 RNF217Q8TC41 542 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 POPDC2Q9HBU9 364 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 PPME1Q9Y570 386 aa12.92□□□□□ -0.34
CAPN1-208ENST00000527323 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 PDE5AO76074 875 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 CRABP2P29373 138 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RPS6KA3P51812 740 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 TRIM32Q13049 653 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 DYNC1I2Q13409 638 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 MED21Q13503 144 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 LPCAT4Q643R3 524 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 CASC4Q6P4E1 433 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 SHKBP1Q8TBC3 707 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RXFP2Q8WXD0 754 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 PCYT2Q99447 389 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 GPAMQ9HCL2 828 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 LOC100653049A0A140TA62 436 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 A0A1B0GVG6 124 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 TRPA1O75762 1119 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 KRT34O76011 436 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 HMGCRP04035 888 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RPL10AP62906 217 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 BEX3Q00994 111 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 PDE1BQ01064 536 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 SURF1Q15526 300 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 SMAD1Q15797 465 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 CNPY1Q3B7I2 92 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 ZPBP2Q6X784 338 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 DENND5BQ6ZUT9 1274 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 CAND1Q86VP6 1230 aaKnown RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 CCDC33Q8N5R6 958 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms