RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 IL17RCQ8NAC3 791 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 SPATA18Q8TC71 538 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 HMGB4Q8WW32 186 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 SEPT5Q99719 369 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ELOVL4Q9GZR5 314 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 GANQ9H2C0 597 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 DPEP3Q9H4B8 488 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 FAM124BQ9H5Z6 455 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-204ENST00000526430 DDX43Q9NXZ2 648 aaKnown RBP11.53□□□□□ -0.56
NEDD8-204ENST00000526430 DSEQ9UL01 958 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 CNTN6Q9UQ52 1028 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 SGK1O00141 431 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 HUS1O60921 280 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 CILPO75339 1184 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 NFATC1O95644 943 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 NTRK1P04629 796 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 PDGFRBP09619 1106 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 TCF3P15923 654 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 HMGA1P17096 107 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 GNL1P36915 607 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 NDST1P52848 882 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 RAD23BP54727 409 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 CUL2Q13617 745 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 SMAD1Q15797 465 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 TAF12Q16514 161 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 EXOC3L4Q17RC7 722 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 GAB4Q2WGN9 574 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 TXNDC8Q6A555 127 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 SCARA5Q6ZMJ2 495 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 GBP6Q6ZN66 633 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 LRRC69Q6ZNQ3 347 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 GPR155Q7Z3F1 870 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 ALLCQ8N6M5 410 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 TXNDC5Q8NBS9 432 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 MRPS31Q92665 395 aaKnown RBP11.52□□□□□ -0.57
NEDD8-204ENST00000526430 WBP1Q96G27 269 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 CDC6Q99741 560 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 CYP3A43Q9HB55 503 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
NEDD8-204ENST00000526430 ANTXRLA6NF34 631 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 KLF8O95600 359 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 CALCAP01258 141 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 HLA-EP13747 358 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 KIR2DL1P43626 348 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 LHX1P48742 406 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 ZNF132P52740 706 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 TNNC1P63316 161 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 GCNT1Q02742 428 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 GRIK2Q13002 908 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 ORC1Q13415 861 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 SYCP1Q15431 976 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 MGAT5BQ3V5L5 792 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 INTS6LQ5JSJ4 861 aaKnown RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 DBX2Q6ZNG2 339 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 SLC4A11Q8NBS3 891 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 NT5C1BQ96P26 610 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 PLCB1Q9NQ66 1216 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 CISHQ9NSE2 258 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 APEX2Q9UBZ4 518 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 GTF3C4Q9UKN8 822 aa11.51□□□□□ -0.57
NEDD8-204ENST00000526430 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
NEDD8-204ENST00000526430 A0A0A0MRY4 1105 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 TCRBV21S2A2A0A5A6 115 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 RRP8O43159 456 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 ADAM23O75077 832 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 USP17L7P0C7H9 530 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 ATXN1LP0C7T5 689 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 UCHL3P15374 230 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 GNSP15586 552 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 PTPN1P18031 435 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 EIF2DP41214 584 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
NEDD8-204ENST00000526430 UBXN1Q04323 297 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 ACOT1Q86TX2 421 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 UNC93AQ86WB7 457 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 MARCH9Q86YJ5 346 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 KIAA1958Q8N8K9 716 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 C12orf29Q8N999 325 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
NEDD8-204ENST00000526430 SETD7Q8WTS6 366 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms