RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 IL18RAPO95256 599 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 BMP15O95972 392 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 TMEM225BP0DP42 221 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 NR4A2P43354 598 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 TXNL4AP83876 142 aaKnown RBP6.37□□□□□ -1.39
COPB1-204ENST00000526191 MTAPQ13126 283 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 CC2D1BQ5T0F9 858 aaKnown RBP6.37□□□□□ -1.39
COPB1-204ENST00000526191 PXDC1Q5TGL8 231 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 GGT6Q6P531 493 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 SHC4Q6S5L8 630 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 VSTM1Q6UX27 236 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 VPS50Q96JG6 964 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 HEYLQ9NQ87 328 aaPredicted RBP6.37□□□□□ -1.39
COPB1-204ENST00000526191 FZD4Q9ULV1 537 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 AFG3L2Q9Y4W6 797 aa6.37□□□□□ -1.39
COPB1-204ENST00000526191 MROH2AA6NES4 1674 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 KPNA5O15131 536 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 WDR47O94967 919 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 ATICP31939 592 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 YPEL5P62699 121 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 ZNF91Q05481 1191 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 ZNF543Q08ER8 600 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 TMEM63BQ5T3F8 832 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 P3H2Q8IVL5 708 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 C9orf106Q8NAJ2 232 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 MBD3L2Q8NHZ7 208 aaPredicted RBP6.36□□□□□ -1.39
COPB1-204ENST00000526191 TTC17Q96AE7 1141 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 COQ8BQ96D53 544 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 SAP30LQ9HAJ7 183 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 GJB4Q9NTQ9 266 aa6.36□□□□□ -1.39
COPB1-204ENST00000526191 CFAP65Q6ZU64 1925 aaKnown RBP6.36□□□□□ -1.39
COPB1-204ENST00000526191 THAP12O43422 761 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 MBPP02686 304 aaPredicted RBP6.35□□□□□ -1.39
COPB1-204ENST00000526191 CYP19A1P11511 503 aaPredicted RBP6.35□□□□□ -1.39
COPB1-204ENST00000526191 CFHR1Q03591 330 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 CRTC1Q6UUV9 634 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 KRT28Q7Z3Y7 464 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 NRACQ8N912 160 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 C16orf52Q8NHV5 167 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 SUN3Q8TAQ9 357 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 IGFBPL1Q8WX77 278 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 CUL5Q93034 780 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 LRRC46Q96FV0 321 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 SIGLEC11Q96RL6 698 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 TMEM184CQ9NVA4 438 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 MTMR4Q9NYA4 1195 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 FAM50BQ9Y247 325 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 DNMT1P26358 1616 aaKnown RBP6.35□□□□□ -1.39
COPB1-204ENST00000526191 NEURL4Q96JN8 1562 aa6.35□□□□□ -1.39
COPB1-204ENST00000526191 TCOF1Q13428 1488 aaKnown RBP6.34□□□□□ -1.39
COPB1-204ENST00000526191 SHANK2Q9UPX8 1470 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 CDC42BPAQ5VT25 1732 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 POM121BA6NF01 834 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 FOXN3O00409 490 aaPredicted RBP6.34□□□□□ -1.39
COPB1-204ENST00000526191 FGBP02675 491 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 ARP10275 920 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 GALNSP34059 522 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 THBS4P35443 961 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 PBX1P40424 430 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 CCDC15Q0P6D6 951 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 KPNB1Q14974 876 aaKnown RBP6.34□□□□□ -1.39
COPB1-204ENST00000526191 RBMS2Q15434 407 aaKnown RBP6.34□□□□□ -1.39
COPB1-204ENST00000526191 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.34□□□□□ -1.39
COPB1-204ENST00000526191 RNF152Q8N8N0 203 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 FAM71DQ8N9W8 422 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 ATP11CQ8NB49 1132 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 PIGOQ8TEQ8 1089 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 HIC2Q96JB3 615 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 TMEM79Q9BSE2 394 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 ZCWPW1Q9H0M4 648 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 PREX2Q70Z35 1606 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 REREQ9P2R6 1566 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 ABCC1P33527 1531 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 AGLP35573 1532 aa6.34□□□□□ -1.39
COPB1-204ENST00000526191 SLC5A1P13866 664 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 PRF1P14222 555 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 TSHRP16473 764 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 DNASE1L3Q13609 305 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 ACOX1Q15067 660 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
COPB1-204ENST00000526191 AASDHQ4L235 1098 aaPredicted RBP6.33□□□□□ -1.4
COPB1-204ENST00000526191 ABLIM2Q6H8Q1 611 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 KRT73Q86Y46 540 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 C16orf71Q8IYS4 520 aaPredicted RBP6.33□□□□□ -1.4
COPB1-204ENST00000526191 CCDC33Q8N5R6 958 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 MLH3Q9UHC1 1453 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 NPATQ14207 1427 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 PTPRKQ15262 1439 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 CNTLNQ9NXG0 1405 aa6.33□□□□□ -1.4
COPB1-204ENST00000526191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.32□□□□□ -1.4
COPB1-204ENST00000526191 SAMD9LQ8IVG5 1584 aa6.32□□□□□ -1.4
COPB1-204ENST00000526191 VWDEQ8N2E2 1590 aa6.32□□□□□ -1.4
COPB1-204ENST00000526191 CPS1P31327 1500 aa6.32□□□□□ -1.4
COPB1-204ENST00000526191 SOCS2O14508 198 aa6.32□□□□□ -1.4
COPB1-204ENST00000526191 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
COPB1-204ENST00000526191 FGFR2P21802 821 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms