RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 SCAMP5Q8TAC9 235 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 TAS1R2Q8TE23 839 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 LOXL4Q96JB6 756 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 ZC3H10Q96K80 434 aaKnown RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 SLITRK1Q96PX8 696 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 HNRNPABQ99729 332 aaKnown RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 SMOQ99835 787 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 UBXN6Q9BZV1 441 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 FAM124BQ9H5Z6 455 aaPredicted RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 APOBEC3GQ9HC16 384 aaKnown RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 TRPC7Q9HCX4 862 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 PARD6AQ9NPB6 346 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 ZNF358Q9NW07 568 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 EBF1Q9UH73 591 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 CHORDC1Q9UHD1 332 aaPredicted RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 FRMD4BQ9Y2L6 1034 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 TDRD15B5MCY1 1934 aaKnown RBP6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 DNAH14Q0VDD8 3507 aa6.3□□□□□ -1.4
CCDC90B-204ENST00000525504 MTCL1Q9Y4B5 1905 aaKnown RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 HHLA1C9JL84 531 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 K7EQS6 105 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 PMM2O15305 246 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 COCHO43405 550 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 CILPO75339 1184 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 BEST1O76090 585 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NFATC1O95644 943 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NR2F2P24468 414 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 HOXC13P31276 330 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 OPRD1P41143 372 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 GCLMP48507 274 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 IFNAR2P48551 515 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 PGFP49763 221 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NDST1P52848 882 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NUCB2P80303 420 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 LMNB2Q03252 620 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SIM2Q14190 667 aaPredicted RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 DHCR24Q15392 516 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 HECTD3Q5T447 861 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 CEP135Q66GS9 1140 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NAIF1Q69YI7 327 aaPredicted RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 KLHDC10Q6PID8 442 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 FOXR2Q6PJQ5 311 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 ACOT1Q86TX2 421 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 FAM35AQ86V20 835 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 PDZD8Q8NEN9 1154 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SLC2A14Q8TDB8 520 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 USP33Q8TEY7 942 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 GAB3Q8WWW8 586 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 CD101Q93033 1021 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SECISBP2LQ93073 1101 aaKnown RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 OTUB2Q96DC9 234 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SMARCD1Q96GM5 515 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 TIGD1Q96MW7 591 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 GSDMAQ96QA5 445 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 TWNKQ96RR1 684 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 FBXO44Q9H4M3 255 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 TMEM8AQ9HCN3 771 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 PNPLA8Q9NP80 782 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 TBC1D14Q9P2M4 693 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 NCDNQ9UBB6 729 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SLC6A14Q9UN76 642 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 SCML2Q9UQR0 700 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 COQ4Q9Y3A0 265 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 CPQQ9Y646 472 aa6.29□□□□□ -1.4
CCDC90B-204ENST00000525504 ACACBO00763 2458 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 ATP8B3O60423 1300 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 CEP295Q9C0D2 2601 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 A6NJY4 79 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 CETN3O15182 167 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 FOXD2O60548 495 aaPredicted RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 CYP17A1P05093 508 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 TRIM49P0CI25 452 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 TRIM49CP0CI26 452 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 KRT13P13646 458 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 PRCPP42785 496 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 TNFRSF4P43489 277 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 KIF11P52732 1056 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 SLC5A3P53794 718 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 ATXN1P54253 815 aaKnown RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 MRPS21P82921 87 aaKnown RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 FKBP3Q00688 224 aaKnown RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 SRSF5Q13243 272 aaKnown RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 CSRP2Q16527 193 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 HSF5Q4G112 596 aaPredicted RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 ZNF658Q5TYW1 1059 aaPredicted RBP6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 ARHGAP17Q68EM7 881 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 KRT39Q6A163 491 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 SPOPLQ6IQ16 392 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 HTR3DQ70Z44 454 aa6.28□□□□□ -1.4
CCDC90B-204ENST00000525504 CACNA2D4Q7Z3S7 1137 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms