RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■■■■■ 137.9
TRIM3-203ENST00000525074 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 DNAJA2O60884 412 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 KRT38O76015 456 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 CRTAMO95727 393 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 APOC2P02655 101 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 NR3C2P08235 984 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ASNSP08243 561 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 KRT7P08729 469 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 CDK4P11802 303 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ABCG1P45844 678 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 HMGCS2P54868 508 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ADARP55265 1226 aaKnown RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 TFAMQ00059 246 aaKnown RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 SP2Q02086 613 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 TEDDM1Q5T9Z0 273 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 LGSNQ5TDP6 509 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 C10orf107Q8IVU9 208 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 TNS4Q8IZW8 715 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 PEBP4Q96S96 227 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ZNF711Q9Y462 761 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 AP4B1Q9Y6B7 739 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 ADCY6O43306 1168 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 PENKP01210 267 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 IDH3AP50213 366 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 FAM160B2Q86V87 743 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 NCAPG2Q86XI2 1143 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
TRIM3-203ENST00000525074 MAGED2Q9UNF1 606 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-203ENST00000525074 K7ERI5 159 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ZBTB14O43829 449 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TBC1D12O60347 775 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CCNT2O60583 730 aaKnown RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 KRT19P08727 400 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 NUDT2P50583 147 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CXCL9Q07325 125 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CES3Q6UWW8 571 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TRIM67Q6ZTA4 783 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 GRIN3AQ8TCU5 1115 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 PLEKHG4BQ96PX9 1271 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 C1orf21Q9H246 121 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 PTTG2Q9NZH5 202 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 STX16-NPEPL1H3BU86 382 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 FOXD2O60548 495 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 LYPLA2O95372 231 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 APOEP02649 317 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 AMHP03971 560 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 DESP17661 470 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MYBPC1Q00872 1141 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 SNAPC2Q13487 334 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 NRF1Q16656 503 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ANKEF1Q9NU02 776 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ARHGEF38Q9NXL2 777 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 GJA3Q9Y6H8 435 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TPP1O14773 563 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 SUPT3HO75486 399 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ZBED1O96006 694 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 ERBB2P04626 1255 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 SLC5A2P31639 672 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CDKL1Q00532 357 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CNTN2Q02246 1040 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MBLAC2Q68D91 279 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TSHZ1Q6ZSZ6 1077 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 DEPTORQ8TB45 409 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 PIWIL1Q96J94 861 aaKnown RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MARK4Q96L34 752 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 LRGUKQ96M69 825 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
TRIM3-203ENST00000525074 CCDC28BQ9BUN5 200 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MRIQ9BWK5 157 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 MAGEB5Q9BZ81 275 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 SLC38A10Q9HBR0 1119 aa13.56□□□□□ -0.24
TRIM3-203ENST00000525074 DOCK5Q9H7D0 1870 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 HMGCRP04035 888 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 GTF2A2P52657 109 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 PGM2L1Q6PCE3 622 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-203ENST00000525074 CEP41Q9BYV8 373 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 R3HDMLQ9H3Y0 253 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 RNF19AQ9NV58 838 aa13.55□□□□□ -0.24
TRIM3-203ENST00000525074 EMCNQ9ULC0 261 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms