RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 LARS2Q15031 903 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 MIDNQ504T8 468 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 PLA1AQ53H76 456 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 RNF187Q5TA31 235 aaPredicted RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 PXDC1Q5TGL8 231 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 MRPL10Q7Z7H8 261 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 MICU3Q86XE3 530 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 SLC15A4Q8N697 577 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 OR56A3Q8NH54 315 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 BPIFB1Q8TDL5 484 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 ABHD8Q96I13 439 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 MOGAT1Q96PD6 335 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 PUS7Q96PZ0 661 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 TRIM5Q9C035 493 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 ARMT1Q9H993 441 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 ZMAT3Q9HA38 289 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 GBA2Q9HCG7 927 aaPredicted RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 ZBTB40Q9NUA8 1239 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 SEMA5BQ9P283 1151 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 HEY2Q9UBP5 337 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 STAP2Q9UGK3 403 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 AMFRQ9UKV5 643 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 TMX2Q9Y320 296 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 FAM208AQ9UK61 1670 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 PASKQ96RG2 1323 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 RANBP2P49792 3224 aaKnown RBP2.11□□□□□ -2.07
CD44-212ENST00000524922 NFAT5O94916 1531 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 LY75O60449 1722 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 MUC3AQ02505 3323 aa2.11□□□□□ -2.07
CD44-212ENST00000524922 RTL1A6NKG5 1358 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ZMYM2Q9UBW7 1377 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 AKAP12Q02952 1782 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 TTC3P53804 2025 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 FAM90A10PA6NDY2 464 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 GLTPD2A6NH11 291 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 PRR23D1E9PI22 279 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 UBE2Q2LH0YL09 131 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 M0R3H8 397 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 GTPBP1O00178 669 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 BTN3A1O00481 513 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 SMAD6O43541 496 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 IGSF3O75054 1194 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 UBXN7O94888 489 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 IL33O95760 270 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ALPLP05186 524 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 PRR23D2P0DMB1 279 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 VEGFAP15692 232 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 CAPN2P17655 700 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 NCLP19338 710 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 EN2P19622 333 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 CCND1P24385 295 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 HTR1BP28222 390 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 UQCRC1P31930 480 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 MCM5P33992 734 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 KCNJ5P48544 419 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 NEK2P51955 445 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 TIRAPP58753 221 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ZNF268Q14587 947 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 NPY5RQ15761 445 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 CERCAMQ5T4B2 595 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 TMTC4Q5T4D3 741 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ZDHHC24Q6UX98 284 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 DLK2Q6UY11 383 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 PTCHD4Q6ZW05 846 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 KCTD20Q7Z5Y7 419 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 UBE2Q1Q7Z7E8 422 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 GRAMD1CQ8IYS0 662 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 C16orf71Q8IYS4 520 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 ZNF548Q8NEK5 533 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 PRSS3P2Q8NHM4 247 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 PPP1R35Q8TAP8 253 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ADAMTS15Q8TE58 950 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 STAG1Q8WVM7 1258 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 HOOK2Q96ED9 719 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 EDC3Q96F86 508 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 GPATCH3Q96I76 525 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 FYTTD1Q96QD9 318 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 TAAR9Q96RI9 348 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 MAP3K14Q99558 947 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 GATA5Q9BWX5 397 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 RTFDC1Q9BY42 306 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 MLXIPLQ9NP71 852 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 SARS2Q9NP81 518 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 TMEM184CQ9NVA4 438 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 PIH1D1Q9NWS0 290 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 SAGE1Q9NXZ1 904 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 CPA4Q9UI42 421 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 DRG1Q9Y295 367 aaKnown RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.1□□□□□ -2.07
CD44-212ENST00000524922 COL4A3BPQ9Y5P4 624 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 CDY1Q9Y6F8 540 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 ADGRF5Q8IZF2 1346 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 IGSF1Q8N6C5 1336 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 CACNA1AO00555 2505 aa2.1□□□□□ -2.07
CD44-212ENST00000524922 NCAPD2Q15021 1401 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 LAMA3Q16787 3333 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ADAMTS7Q9UKP4 1686 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 CD163L1Q9NR16 1453 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 IGKV2D-30A0A075B6S6 120 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms