RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 FAM72DQ6L9T8 149 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 FAM72BQ86X60 149 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 UNC45BQ8IWX7 931 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 HERVK_113Q902F9 699 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 CASP10Q92851 521 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 CEP295NLQ96MC4 621 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 TRIM62Q9BVG3 475 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 SMOC2Q9H3U7 446 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 FBXO44Q9H4M3 255 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 VIPAS39Q9H9C1 493 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 USP29Q9HBJ7 922 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 DDIT4Q9NX09 232 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 ARHGEF38Q9NXL2 777 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 GMIPQ9P107 970 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 WHRNQ9P202 907 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 HSFX1Q9UBD0 423 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 AFF4Q9UHB7 1163 aaKnown RBP12.2□□□□□ -0.46
CSTF3-205ENST00000524775 HPCAL4Q9UM19 191 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 MFHAS1Q9Y4C4 1052 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
CSTF3-205ENST00000524775 MYO7AQ13402 2215 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 CARNS1A5YM72 827 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 KCNU1A8MYU2 1149 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 APOL1O14791 398 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 RTN3O95197 1032 aaPredicted RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 ZSCAN5DPP0CG00 497 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 YWHAQP27348 245 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 HCAR3P49019 387 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 GDF10P55107 478 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 RPL10AP62906 217 aaKnown RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 LMNB2Q03252 620 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 TRIP13Q15645 432 aaPredicted RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 UAP1Q16222 522 aaPredicted RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 PPP6R3Q5H9R7 873 aaPredicted RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 SPOUT1Q5T280 376 aaKnown RBP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 BTBD8Q5XKL5 378 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 NCBP2-AS2Q69YL0 99 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 IQCKQ8N0W5 287 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 FBXO25Q8TCJ0 367 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 RNF139Q8WU17 664 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 TMEM169Q96HH4 297 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 TMEM121Q9BTD3 319 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 OSBPL2Q9H1P3 480 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 FAM204AQ9H8W3 233 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 PRDM16Q9HAZ2 1276 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 AAASQ9NRG9 546 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSTF3-205ENST00000524775 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 SFMBT1Q9UHJ3 866 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 NEU3Q9UQ49 428 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 ZNF148Q9UQR1 794 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 SNX10Q9Y5X0 201 aa12.19□□□□□ -0.46
CSTF3-205ENST00000524775 AGPSO00116 658 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 DCLK1O15075 740 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 PPFIA2O75334 1257 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 GAS8O95995 478 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 HMGA1P17096 107 aaKnown RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 ITIH2P19823 946 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 GBP1P32455 592 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 GBE1Q04446 702 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 IFRD2Q12894 506 aaPredicted RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 TAF10Q12962 218 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 MGAT5BQ3V5L5 792 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 DENND5BQ6ZUT9 1274 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 C7orf61Q8IZ16 206 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 ARHGAP18Q8N392 663 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 ZNF276Q8N554 614 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 RTP4Q96DX8 246 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 OLFM3Q96PB7 478 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 YME1L1Q96TA2 773 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 SEPT5Q99719 369 aaPredicted RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 FAM129AQ9BZQ8 928 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 ZBP1Q9H171 429 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSTF3-205ENST00000524775 CLIC5Q9NZA1 410 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 FNIP2Q9P278 1114 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 NUDT5Q9UKK9 219 aa12.18□□□□□ -0.46
CSTF3-205ENST00000524775 HELZP42694 1942 aaKnown RBP12.17□□□□□ -0.46
CSTF3-205ENST00000524775 BCLAF3A2AJT9 711 aaKnown RBP12.17□□□□□ -0.46
CSTF3-205ENST00000524775 H3BRJ5 948 aa12.17□□□□□ -0.46
CSTF3-205ENST00000524775 C2CD2LO14523 706 aa12.17□□□□□ -0.46
CSTF3-205ENST00000524775 MSI1O43347 362 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms