RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 AMPD3Q01432 767 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 CHRNDQ07001 517 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 IFIT5Q13325 482 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 KLF9Q13886 244 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 BOP1Q14137 746 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 LONRF3Q496Y0 759 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 MAVSQ7Z434 540 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 YTHDF3Q7Z739 585 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 PPP1R3BQ86XI6 285 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 ANKRD18AQ8IVF6 992 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 BRIX1Q8TDN6 353 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 SLC46A1Q96NT5 459 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 ASPSCR1Q9BZE9 553 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 DUSP22Q9NRW4 184 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 LMBRD1Q9NUN5 540 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 DLL3Q9NYJ7 618 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 POLLQ9UGP5 575 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 NOP58Q9Y2X3 529 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 ATP6V0A2Q9Y487 856 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 SCN4AP35499 1836 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 WDR90Q96KV7 1748 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 MYH1P12882 1939 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 MYH8P13535 1937 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 SIPA1L1O43166 1804 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 DDX60LQ5H9U9 1706 aaKnown RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 EYA2O00167 538 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 DCLK1O15075 740 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 KCNAB3O43448 404 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 MOSPD3O75425 235 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 SURF6O75683 361 aaKnown RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 BBOX1O75936 387 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 SNUPNO95149 360 aaKnown RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 AHSGP02765 367 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 POU2F2P09086 479 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 NHLRC4P0CG21 123 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 ADORA1P30542 326 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 ALDH1B1P30837 517 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 LIPAP38571 399 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 CLCN2P51788 898 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 TIMM10P62072 90 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 TFCP2Q12800 502 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 GTF2H3Q13889 308 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 IQCB1Q15051 598 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 ETFDHQ16134 617 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 CCDC57Q2TAC2 916 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 PGS1Q32NB8 556 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 TREML2Q5T2D2 321 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 SLC9A4Q6AI14 798 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 LAYNQ6UX15 382 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 LDHAL6AQ6ZMR3 332 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 RPAP2Q8IXW5 612 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 C16orf71Q8IYS4 520 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 RP9Q8TA86 221 aaKnown RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 TBC1D16Q8TBP0 767 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 OTUD7AQ8TE49 926 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 ABHD8Q96I13 439 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 FCRL4Q96PJ5 515 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 FSD1LQ9BXM9 530 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 RTFDC1Q9BY42 306 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-208ENST00000524652 BHMT2Q9H2M3 363 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 DCTPP1Q9H773 170 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 IL1RAPL2Q9NP60 686 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 PNPOQ9NVS9 261 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 TBC1D30Q9Y2I9 924 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 VCANP13611 3396 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 NAV1Q8NEY1 1877 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 LAMA4Q16363 1823 aa3.54□□□□□ -1.84
CSDE1-208ENST00000524652 LAMB1P07942 1786 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 MED23Q9ULK4 1368 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 BRCA2P51587 3418 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 A0A1B0GUL7 405 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 YDJCA8MPS7 323 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PRRT4C9JH25 899 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 H7C1Q1 480 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SMIM22K7EJ46 135 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 ADAMTS3O15072 1205 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 DNAJB5O75953 348 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 CIAO1O76071 339 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 UFL1O94874 794 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 TJP3O95049 919 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PDE8BO95263 885 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 BMP15O95972 392 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 NPSP0C0P6 89 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 MPGP29372 298 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 IGHMBP2P38935 993 aaKnown RBP3.53□□□□□ -1.84
CSDE1-208ENST00000524652 VIPR2P41587 438 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 GYG1P46976 350 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 NKX6-1P78426 367 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-208ENST00000524652 HDAC1Q13547 482 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-208ENST00000524652 CEP78Q5JTW2 689 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PCID2Q5JVF3 399 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SMC5Q8IY18 1101 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 LRRC71Q8N4P6 559 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 DENND1AQ8TEH3 1009 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 ATG4AQ8WYN0 398 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SLC35A4Q96G79 324 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF48Q96MX3 618 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms