RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 MIB1Q86YT6 1006 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 MAML2Q8IZL2 1156 aaPredicted RBP18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 C3orf20Q8ND61 904 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 OSCP1Q8WVF1 389 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 NDRG1Q92597 394 aaKnown RBP18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 EDEM1Q92611 657 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 ATP2A3Q93084 1043 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SHDQ96IW2 340 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 CNTNAP3BQ96NU0 1288 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 C11orf70Q9BRQ4 267 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 CNTNAP3Q9BZ76 1288 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 PARVAQ9NVD7 372 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SMPD4Q9NXE4 827 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 CFAP97Q9P2B7 532 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SCINQ9Y6U3 715 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 NOTCH4Q99466 2003 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 GPR179Q6PRD1 2367 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 MYH10P35580 1976 aa18.33■□□□□ 0.52
PACSIN3-202ENST00000524509 SLC12A8A0AV02 714 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 DDX3XO00571 662 aaKnown RBP eCLIP18.32■□□□□ 0.525e-8■■□□□ 12.6
PACSIN3-202ENST00000524509 KRT37O76014 449 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 NFATC1O95644 943 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 KRT3P12035 628 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 SLC18A3Q16572 532 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 ZNF528Q3MIS6 628 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 C10orf76Q5T2E6 689 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 DNAJC24Q6P3W2 148 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 ALKBH5Q6P6C2 394 aaKnown RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 MON1BQ7L1V2 547 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 GPIHBP1Q8IV16 184 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 CCDC170Q8IYT3 715 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 CLEC4CQ8WTT0 213 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 DDX50Q9BQ39 737 aaKnown RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 SMG9Q9H0W8 520 aaKnown RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 ISCUQ9H1K1 167 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 DUS2Q9NX74 493 aaKnown RBP18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 ARHGAP20Q9P2F6 1191 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 CCL26Q9Y258 94 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 TLR6Q9Y2C9 796 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 ACACBO00763 2458 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 PATJQ8NI35 1801 aa18.32■□□□□ 0.52
PACSIN3-202ENST00000524509 MIA3Q5JRA6 1907 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 SIGLEC16A6NMB1 481 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 NRDCO43847 1150 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 CHKAP35790 457 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 EIF4A3P38919 411 aaKnown RBP18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 PGFP49763 221 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 WDR59Q6PJI9 974 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 POTEHQ6S545 545 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 TMTC1Q8IUR5 882 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 DEFB106AQ8N104 65 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 CPA6Q8N4T0 437 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 TC2NQ8N9U0 490 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 AZIN2Q96A70 460 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 FOXQ1Q9C009 403 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 C8orf33Q9H7E9 229 aaPredicted RBP18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 NHEJ1Q9H9Q4 299 aaPredicted RBP18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 GKN1Q9NS71 199 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 LCMT1Q9UIC8 334 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 FBXO4Q9UKT5 387 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 NAALADL1Q9UQQ1 740 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 GREB1Q4ZG55 1949 aa18.31■□□□□ 0.52
PACSIN3-202ENST00000524509 TMCO5BA8MYB1 307 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 GOLGA8SH3BPF8 625 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 APOEP02649 317 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 CYLC1P35663 651 aaPredicted RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 SLC11A2P49281 568 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 TBX4P57082 545 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 PTP4A2Q12974 167 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 GRM2Q14416 872 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 PREPLQ4J6C6 727 aaPredicted RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 DCUN1D2Q6PH85 259 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 TTC16Q8NEE8 873 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 DQX1Q8TE96 717 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 ZFRQ96KR1 1074 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 FAM83CQ9BQN1 747 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 RPP25Q9BUL9 199 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 PLA2G2FQ9BZM2 168 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 FAM204AQ9H8W3 233 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 TJP2Q9UDY2 1190 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 NUDT5Q9UKK9 219 aa18.3■□□□□ 0.52
PACSIN3-202ENST00000524509 MAN2B1O00754 1011 aa18.29■□□□□ 0.52
PACSIN3-202ENST00000524509 STC2O76061 302 aa18.29■□□□□ 0.52
PACSIN3-202ENST00000524509 TRUB2O95900 331 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms