RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CNPY4Q8N129 248 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SCML4Q8N228 414 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 TDRD5Q8NAT2 981 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 HDAC7Q8WUI4 952 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SLC35F5Q8WV83 523 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 KBTBD7Q8WVZ9 684 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 RSAD2Q8WXG1 361 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 KCTD13Q8WZ19 329 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 ELMO3Q96BJ8 720 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SENP8Q96LD8 212 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 HEXIM2Q96MH2 286 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 MCEEQ96PE7 176 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 TWNKQ96RR1 684 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 MYADMQ96S97 322 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CPXM1Q96SM3 734 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 HNRNPABQ99729 332 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 SH3GL2Q99962 352 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 TRIM62Q9BVG3 475 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 OSBPL8Q9BZF1 889 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 DDX47Q9H0S4 455 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 EPC1Q9H2F5 836 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SNX25Q9H3E2 840 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 PNPLA8Q9NP80 782 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 EHD2Q9NZN4 543 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 WHRNQ9P202 907 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 HPCAL4Q9UM19 191 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 BACE2Q9Y5Z0 518 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 COL4A3Q01955 1670 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 DOCK8Q8NF50 2099 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MYO10Q9HD67 2058 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 GOLGA6BA6NDN3 693 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 C2CD4BA6NLJ0 364 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 TMEM110-MUSTN1A8MSY1 372 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 A8MXQ7 604 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 H7C4K7 107 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 M0QZQ0 153 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 NRG2O14511 850 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 CYB561D2O14569 222 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 XPO1O14980 1071 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 SYN3O14994 580 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MDM4O15151 490 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 HCRTO43612 131 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 TBC1D4O60343 1298 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 LRCH4O75427 683 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 FBXO21O94952 628 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 VNN2O95498 520 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MYBL2P10244 700 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PSMA2P25787 234 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PCSK1P29120 753 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ECHS1P30084 290 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RDXP35241 583 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 GNL1P36915 607 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 PTGIRP43119 386 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RAP1GAPP47736 663 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 DNA2P51530 1060 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ZNF135P52742 658 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 CDH8P55286 799 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RPL7AP62424 266 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 YWHAHQ04917 246 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 ADCY1Q08828 1119 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ZNF252P-AS1Q0IIN9 211 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CBLBQ13191 982 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PTK6Q13882 451 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 SLMAPQ14BN4 828 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PDK2Q15119 407 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MAPRE1Q15691 268 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 CCDC142Q17RM4 750 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 GOLGA7BQ2TAP0 167 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ZNF394Q53GI3 561 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 BOLA3Q53S33 107 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ODF2Q5BJF6 829 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 EFHC1Q5JVL4 640 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 OVOS1Q6IE37 1185 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 SLC8B1Q6J4K2 584 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ZNF280DQ6N043 979 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 OLFML1Q6UWY5 402 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 BEND5Q7L4P6 421 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RELL1Q8IUW5 271 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 MAP7D3Q8IWC1 876 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 KLHL7Q8IXQ5 586 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 IQCKQ8N0W5 287 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 TTC9BQ8N6N2 239 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CMASQ8NFW8 434 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 OR10T2Q8NGX3 314 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ATL2Q8NHH9 583 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ITFG1Q8TB96 612 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 ING5Q8WYH8 240 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 NKD2Q969F2 451 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 MAGOHBQ96A72 148 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 NECTIN4Q96NY8 510 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 SLITRK1Q96PX8 696 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 FMO2Q99518 471 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 LRFN3Q9BTN0 628 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 AP1M1Q9BXS5 423 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CRISPLD1Q9H336 500 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 PLEKHA4Q9H4M7 779 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms