RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ANO3	Q9BYT9	981 aa		4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	ZCCHC17	Q9NP64	241 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	PNPLA8	Q9NP80	782 aa		4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	OBP2B	Q9NPH6	170 aa		4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	AASS	Q9UDR5	926 aa		4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	STAP2	Q9UGK3	403 aa		4.81	□□□□□ -1.64
PCM1-223	ENST00000524356	RRBP1	Q9P2E9	1410 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SHANK3	Q9BYB0	1731 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	FMN2	Q9NZ56	1722 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GOLGA6L3	A6NEY3	463 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	ERVV-2	B6SEH9	535 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	YY2	O15391	372 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	PRSS23	O95084	383 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	IL18RAP	O95256	599 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GAST	P01350	101 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	DNTT	P04053	509 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	PARP1	P09874	1014 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	AKR1B1	P15121	316 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GCSH	P23434	173 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	EEF1G	P26641	437 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SREBF1	P36956	1147 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SLC5A3	P53794	718 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	RAP2B	P61225	183 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	KRT83	P78385	493 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SF3B3	Q15393	1217 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	TIGD6	Q17RP2	521 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GEN1	Q17RS7	908 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	FAM110C	Q1W6H9	321 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SMIM5	Q71RC9	77 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SESTD1	Q86VW0	696 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	IL31RA	Q8NI17	732 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	DENND1A	Q8TEH3	1009 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	AUTS2	Q8WXX7	1259 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	HTRA1	Q92743	480 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	KAT5	Q92993	513 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	CDHR1	Q96JP9	859 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	COLEC11	Q9BWP8	271 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	REXO4	Q9GZR2	422 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	ARMT1	Q9H993	441 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	NRIP3	Q9NQ35	241 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	OLA1	Q9NTK5	396 aa	Known RBP	4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GJB4	Q9NTQ9	266 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	NSMCE4A	Q9NXX6	385 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	ABCA3	Q99758	1704 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	SPATA31E1	Q6ZUB1	1445 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	ATP10D	Q9P241	1426 aa		4.8	□□□□□ -1.64
PCM1-223	ENST00000524356	GPRASP1	Q5JY77	1395 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	USP19	O94966	1318 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	COL14A1	Q05707	1796 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356		A0A088AWK7	358 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356		A0A1W2PPH5	198 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CCDC151	A5D8V7	595 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	AQP12B	A6NM10	295 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	FOXN3	O00409	490 aa	Predicted RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	PPEF2	O14830	753 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	P4HA2	O15460	535 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	HOXC11	O43248	304 aa	Predicted RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	SOAT2	O75908	522 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	FTL	P02792	175 aa	Predicted RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	RPL17	P18621	184 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	EPHB2	P29323	1055 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	SERPINF1	P36955	418 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	DRG2	P55039	364 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CCT2	P78371	535 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CREM	Q03060	361 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	PPARA	Q07869	468 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	WASHC5	Q12768	1159 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ZNF260	Q3ZCT1	412 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	FAM47A	Q5JRC9	791 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	FBXO47	Q5MNV8	452 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	KAZN	Q674X7	775 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CASC1	Q6TDU7	716 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ZNF66	Q6ZN08	573 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ESPNL	Q6ZVH7	1005 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	LYSMD2	Q8IV50	215 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	NRG4	Q8WWG1	115 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ATRIP	Q8WXE1	791 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	HERVK_113	Q902F9	699 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	TFAP2B	Q92481	460 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	RRP36	Q96EU6	259 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	TREX2	Q9BQ50	279 aa	Predicted RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CNPPD1	Q9BV87	410 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	KCTD10	Q9H3F6	313 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ELAC1	Q9H777	363 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	ELOVL5	Q9NYP7	299 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	WWOX	Q9NZC7	414 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	SLC13A4	Q9UKG4	626 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	SIK3	Q9Y2K2	1263 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	CHD4	Q14839	1912 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	PCNT	O95613	3336 aa		4.79	□□□□□ -1.64
PCM1-223	ENST00000524356	DHX57	Q6P158	1386 aa	Known RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MAP3K5	Q99683	1374 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	ACE	P12821	1306 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356		A0A087X0M5	115 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356		A0A1B0GX30	115 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	PGPEP1L	A6NFU8	196 aa		4.78	□□□□□ -1.64
PCM1-223	ENST00000524356		F5H0A9	414 aa	Predicted RBP	4.78	□□□□□ -1.64
PCM1-223	ENST00000524356	MPPED1	O15442	326 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms