RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 DDX60LQ5H9U9 1706 aaKnown RBP4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PLXNA3P51805 1871 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 MAP3K19Q56UN5 1328 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 CYSRT1A8MQ03 144 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 UBE2Q2LH0YL09 131 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 H3BNC9 293 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 M0QYG6 137 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 SNHG28P0DPA3 235 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PPIFP30405 207 aaKnown RBP4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 CCKARP32238 428 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 TWIST1Q15672 202 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 THEMIS2Q5TEJ8 643 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 FCRL6Q6DN72 434 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PRR5LQ6MZQ0 368 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 IRF2BP2Q7Z5L9 587 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PPP1R3BQ86XI6 285 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 PIGOQ8TEQ8 1089 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 ATG4AQ8WYN0 398 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 TNPO1Q92973 898 aaKnown RBP4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 CDCA5Q96FF9 252 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 EBF3Q9H4W6 596 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 SPEF1Q9Y4P9 236 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 SPTBN2O15020 2390 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 ROCK1Q13464 1354 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 RAB3GAP2Q9H2M9 1393 aa4.77□□□□□ -1.65
NSMCE2-211ENST00000523549 A1L4Q6 167 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 POC1B-GALNT4F8VUJ3 575 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 SOCS2O14508 198 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 FCHO1O14526 889 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 GNAI2P04899 355 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 NPSP0C0P6 89 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 CCL5P13501 91 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 PDCP20941 246 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 ATP5F1P24539 256 aaPredicted RBP4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 SP3Q02447 781 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 LONRF3Q496Y0 759 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 MIS18BP1Q6P0N0 1132 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 Q6ZWC4 215 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 HEATR3Q7Z4Q2 680 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 LURAP1LQ8IV03 231 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 CNGA4Q8IV77 575 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 GALNT4Q8N4A0 578 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 LRRC71Q8N4P6 559 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 GLG1Q92896 1179 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 MASTLQ96GX5 879 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 VCPIP1Q96JH7 1222 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 ASPSCR1Q9BZE9 553 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 ABCF2Q9UG63 623 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 FEZ2Q9UHY8 353 aaPredicted RBP4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 SCAF8Q9UPN6 1271 aaKnown RBP4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 GVINP1Q7Z2Y8 2422 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 LTBP2Q14767 1821 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 NPC1L1Q9UHC9 1359 aa4.76□□□□□ -1.65
NSMCE2-211ENST00000523549 DTNBO60941 627 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 FGBP02675 491 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 AHSGP02765 367 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 ATXN1LP0C7T5 689 aaKnown RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CYP2A6P11509 494 aaPredicted RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CCND1P24385 295 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 PLCD1P51178 756 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 PDE1AP54750 535 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 LOXL3P58215 753 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 HTRA4P83105 476 aaPredicted RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CXCL9Q07325 125 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 GTF2H3Q13889 308 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 MTHFD1LQ6UB35 978 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 KIRREL2Q6UWL6 708 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 USP45Q70EL2 814 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CPA6Q8N4T0 437 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 NRACQ8N912 160 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 PRSS3P2Q8NHM4 247 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 C16orf52Q8NHV5 167 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 DIS3LQ8TF46 1054 aaKnown RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 U2AF1L4Q8WU68 220 aaKnown RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 RAPGEF4Q8WZA2 1011 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 DAZAP1Q96EP5 407 aaKnown RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 LENG8Q96PV6 779 aaPredicted RBP4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 SNX18Q96RF0 628 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CHD7Q9P2D1 2997 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 CACNA1HO95180 2353 aa4.75□□□□□ -1.65
NSMCE2-211ENST00000523549 ASTN2O75129 1339 aaPredicted RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 CGNL1Q0VF96 1302 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 COL4A6Q14031 1691 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 ZNF462Q96JM2 2506 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 TCRBV5S1A1TA0A578 114 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 CHRM5P08912 532 aaPredicted RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 TYRP14679 529 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 IL1R2P27930 398 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 PXNP49023 591 aaPredicted RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 IQCB1Q15051 598 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 LRRC41Q15345 812 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 ST3GAL2Q16842 350 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 ARHGAP40Q5TG30 622 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 EMC10Q5UCC4 262 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms