RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PGBD2Q6P3X8 592 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 DNAJC10Q8IXB1 793 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 PNPLA1Q8N8W4 532 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 MMS19Q96T76 1030 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 NUDT22Q9BRQ3 303 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 TMEM8AQ9HCN3 771 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 COMMD10Q9Y6G5 202 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 ITSN2Q9NZM3 1697 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 PPFIA2O75334 1257 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 GLP2RO95838 553 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 C1RP00736 705 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 SRGAP2BP0DMP2 458 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 DEUP1Q05D60 604 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 BCDIN3DQ7Z5W3 292 aaKnown RBP6.87□□□□□ -1.31
CPNE3-206ENST00000523469 RASGRP3Q8IV61 690 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.87□□□□□ -1.31
CPNE3-206ENST00000523469 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
CPNE3-206ENST00000523469 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 CRB3Q9BUF7 120 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
CPNE3-206ENST00000523469 NUP153P49790 1475 aaKnown RBP6.86□□□□□ -1.31
CPNE3-206ENST00000523469 AOX1Q06278 1338 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 SUV39H1O43463 412 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 PEX14O75381 377 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 PBX1P40424 430 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 RENBPP51606 427 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 NANOS3P60323 173 aaKnown RBP6.86□□□□□ -1.31
CPNE3-206ENST00000523469 TXNL4AP83876 142 aaKnown RBP6.86□□□□□ -1.31
CPNE3-206ENST00000523469 AASDHQ4L235 1098 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-206ENST00000523469 C4orf46Q504U0 113 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 GRHL2Q6ISB3 625 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 MYLK4Q86YV6 388 aaPredicted RBP6.86□□□□□ -1.31
CPNE3-206ENST00000523469 P3H2Q8IVL5 708 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 LINC01465Q8N7H1 131 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 ZNF527Q8NB42 609 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 IGSF9Q9P2J2 1179 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 ASAP1Q9ULH1 1129 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 SRCAPQ6ZRS2 3230 aa6.86□□□□□ -1.31
CPNE3-206ENST00000523469 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 PHLPP1O60346 1717 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 ROBO1Q9Y6N7 1651 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 F5H423 210 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 NTSR2O95665 410 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 COPB1P53618 953 aaKnown RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 CHAF1AQ13111 956 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 KCNJ12Q14500 433 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 ZNF788Q6ZQV5 615 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 C12orf76Q8N812 135 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 VPS37AQ8NEZ2 397 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 HASPINQ8TF76 798 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 FYTTD1Q96QD9 318 aaKnown RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 CINPQ9BW66 212 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 RXFP3Q9NSD7 469 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 GAR1Q9NY12 217 aaKnown RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 ARHGAP5Q13017 1502 aa6.85□□□□□ -1.31
CPNE3-206ENST00000523469 XIRP1Q702N8 1843 aaKnown RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 ARHGEF17Q96PE2 2063 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-206ENST00000523469 PLCH2O75038 1416 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 BTBD19C9JJ37 291 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 POC1B-GALNT4F8VUJ3 575 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 PIP5K1BO14986 540 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 CA12O43570 354 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 SKAP2O75563 359 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 MT-CO3P00414 261 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 APEHP13798 732 aaKnown RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 NPPBP16860 134 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 ZNF37AP17032 561 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 DRD1P21728 446 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 PROK1P58294 105 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 CFHR3Q02985 330 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 TMEM196Q5HYL7 178 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 FAM90A2PQ658T7 463 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 SERPINA13PQ6UXR4 307 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 CLASRPQ8N2M8 674 aaKnown RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 GALNT4Q8N4A0 578 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 FAM71DQ8N9W8 422 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 ADAMTS18Q8TE60 1221 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 POF1BQ8WVV4 589 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 OVCA2Q8WZ82 227 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 PMM1Q92871 262 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 EDC3Q96F86 508 aaKnown RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 ASIC5Q9NY37 505 aa6.84□□□□□ -1.31
CPNE3-206ENST00000523469 CDK13Q14004 1512 aaKnown RBP6.84□□□□□ -1.31
CPNE3-206ENST00000523469 SAMD9Q5K651 1589 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 SETBP1Q9Y6X0 1596 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 KIDINS220Q9ULH0 1771 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 TCRBV5S1A1TA0A578 114 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 UBE2Q2LH0YL09 131 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 SMIM22K7EJ46 135 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 DHHO43323 396 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 GCATO75600 419 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 LDHAP00338 332 aaKnown RBP6.83□□□□□ -1.32
CPNE3-206ENST00000523469 GPC5P78333 572 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms