RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CYP4A22Q5TCH4 519 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 NAIF1Q69YI7 327 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-211ENST00000522802 C1orf228Q6PIY5 440 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 RTL10Q7L3V2 364 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 YAF2Q8IY57 180 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TCEAL8Q8IYN2 117 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 ZNF461Q8TAF7 563 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TBCKQ8TEA7 893 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 JMJD8Q96S16 334 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 LXNQ9BS40 222 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
VPS13B-211ENST00000522802 PIF1Q9H611 641 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 ASAH2Q9NR71 780 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 SLC8A2Q9UPR5 921 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 OBSL1O75147 1896 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 PCDH15Q96QU1 1955 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 UNC79Q9P2D8 2635 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TRBV23OR9-2A0A075B6M9 112 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 NPHP3-ACAD11A0A0J9YXS1 232 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 KLF18A0A0U1RQI7 1052 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 A0A1B0GUA9 196 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 OTOL1A6NHN0 477 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 DLX3O60479 287 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 C1QL1O75973 258 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 EGFP01133 1207 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 EDN1P05305 212 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 THP07101 528 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PABPC1P11940 636 aaKnown RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PLS3P13797 630 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 ATF2P15336 505 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PAMP19021 973 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 BCKDHBP21953 392 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 GLRA2P23416 452 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 YWHABP31946 246 aaKnown RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 ELF1P32519 619 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 ECI1P42126 302 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 IRX4P78413 519 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 SCAPQ12770 1279 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 MAP4K2Q12851 820 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TESK1Q15569 626 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 XKR9Q5GH70 373 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TMEM196Q5HYL7 178 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 CREB3L3Q68CJ9 461 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PMS2CLQ68D20 193 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 GALNT18Q6P9A2 607 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 SYNE3Q6ZMZ3 975 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TMC8Q8IU68 726 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 SYNPOQ8N3V7 929 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 LILRB2Q8N423 598 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 CHCHD4Q8N4Q1 142 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TCP11Q8WWU5 503 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 LRIG1Q96JA1 1093 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 POLR3CQ9BUI4 534 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 TPSD1Q9BZJ3 242 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 LSG1Q9H089 658 aaKnown RBP6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PDZD7Q9H5P4 517 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 FSCN3Q9NQT6 498 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 VPS54Q9P1Q0 977 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 YIPF1Q9Y548 306 aa6.92□□□□□ -1.3
VPS13B-211ENST00000522802 PTPRBP23467 1997 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PI4KAP42356 2102 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC194A0A1B0GVG4 234 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 ASAP2O43150 1006 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PRODHO43272 600 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 RHOBTB1O94844 696 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 VNN2O95498 520 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 U2AF2P26368 475 aaKnown RBP eCLIP6.91□□□□□ -1.31e-6■■■■□ 25.1
VPS13B-211ENST00000522802 GNA11P29992 359 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 L1CAMP32004 1257 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 CYP4A11Q02928 519 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 NCBP1Q09161 790 aaKnown RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PPP2R5CQ13362 524 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 TFDP1Q14186 410 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 CTTNQ14247 550 aaKnown RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 MXD4Q14582 209 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 KARSQ15046 597 aaKnown RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 UPP1Q16831 310 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PRSS53Q2L4Q9 553 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 YOD1Q5VVQ6 348 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 E4F1Q66K89 784 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 IQCEQ6IPM2 695 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PIP4P1Q86T03 277 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 NOSTRINQ8IVI9 506 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 ARID3BQ8IVW6 561 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 MDM1Q8TC05 714 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC12Q8WUD4 166 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 KCTD13Q8WZ19 329 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 MRFAP1L1Q96HT8 127 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms