RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PNMA6EA0A0J9YXQ4 647 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC38A8A6NNN8 435 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 LINC00473A8K010 186 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 PPM1DO15297 605 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 RGS10O43665 173 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 TFRCP02786 760 aaKnown RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 ZNF37AP17032 561 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 TUBP50607 506 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 PAPOLAP51003 745 aaKnown RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 C21orf58P58505 322 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 CHRNDQ07001 517 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 DDX10Q13206 875 aaKnown RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 CYP1B1Q16678 543 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 HYIQ5T013 277 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 DEPDC1Q5TB30 811 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 SYCE2Q6PIF2 218 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 RASGRP2Q7LDG7 609 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 ESX1Q8N693 406 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 PAF1Q8N7H5 531 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 PPHLN1Q8NEY8 458 aaKnown RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 SKA1Q96BD8 255 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 GRAMD1AQ96CP6 724 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 CPNE5Q9HCH3 593 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 TERF2IPQ9NYB0 399 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 NFU1Q9UMS0 254 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 SH2B3Q9UQQ2 575 aa5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 DRG1Q9Y295 367 aaKnown RBP5.35□□□□□ -1.55
HMGB1P1-201ENST00000522557 CCDC151A5D8V7 595 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 HMX3A6NHT5 357 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 SPRY2O43597 315 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 PPP6R2O75170 966 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 WDR47O94967 919 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 VNN1O95497 513 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 CER1O95813 267 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 CD4P01730 458 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 PDHA1P08559 390 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 SRGAP2BP0DMP2 458 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 NR2F6P10588 404 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 CNTFP26441 200 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 CD38P28907 300 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 MCM5P33992 734 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 PBX1P40424 430 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 NR1H2P55055 460 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 FAM3BP58499 235 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 MRPS21P82921 87 aaKnown RBP5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 DCTN1Q14203 1278 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 COLEC12Q5KU26 742 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 TSTD2Q5T7W7 516 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 ATPAF1Q5TC12 328 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 GRHL2Q6ISB3 625 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 RINT1Q6NUQ1 792 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 HTRA1Q92743 480 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 RFKQ969G6 155 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 UROC1Q96N76 676 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 TRAPPC9Q96Q05 1148 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 MECRQ9BV79 373 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 ENTPD2Q9Y5L3 495 aa5.34□□□□□ -1.55
HMGB1P1-201ENST00000522557 B4E171 279 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 ZSCAN9O15535 394 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 EPB41L2O43491 1005 aaKnown RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 IL6RP08887 468 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 CAPN3P20807 821 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 TNFAIP3P21580 790 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 TSPAN7P41732 249 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 GEMIN4P57678 1058 aaKnown RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 UBE3AQ05086 875 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 TAF12Q16514 161 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 TMEM196Q5HYL7 178 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 GRASPQ7Z6J2 395 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 CCDC117Q8IWD4 279 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 NME8Q8N427 588 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 PCYOX1LQ8NBM8 494 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 CSGALNACT1Q8TDX6 532 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 GLG1Q92896 1179 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 VOPP1Q96AW1 172 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 FKBP10Q96AY3 582 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 KTI12Q96EK9 354 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 MAELQ96JY0 434 aaKnown RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 TIMP4Q99727 224 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 NDUFAF4Q9P032 175 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 IFT80Q9P2H3 777 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 ARPP21Q9UBL0 812 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 STEAP1Q9UHE8 339 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 KAT6BQ8WYB5 2073 aa5.33□□□□□ -1.56
HMGB1P1-201ENST00000522557 A1L4Q6 167 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 KIF28PB7ZC32 967 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 EXOC5O00471 708 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 SLC16A3O15427 465 aaKnown RBP5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 ORC4O43929 436 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 LARGE1O95461 756 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 MBPP02686 304 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 SERPINA4P29622 427 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 PRKAR1BP31321 381 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 LIPAP38571 399 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms