RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, human

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-222	ENST00000522476	VPS52	Q8N1B4	723 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	GLIS1	Q8NBF1	620 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	DIS3L	Q8TF46	1054 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	PCED1B	Q96HM7	432 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	C9orf72	Q96LT7	481 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	2e-6	■■■□□ 16
NDRG1-222	ENST00000522476	CSPG4P5	Q96PW8	444 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	XPO6	Q96QU8	1125 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	ELAC1	Q9H777	363 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	MIOS	Q9NXC5	875 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	NKIRAS1	Q9NYS0	192 aa		13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	SMG5	Q9UPR3	1016 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-222	ENST00000522476	TRIP12	Q14669	1992 aa	Predicted RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	TRIP11	Q15643	1979 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476		M0QYT0	321 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	MTSS1	O43312	755 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	HCRT	O43612	131 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	ATP2C2	O75185	946 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	LTF	P02788	710 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CKB	P12277	381 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CHN1	P15882	459 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	TPSB2	P20231	275 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	GBP2	P32456	591 aa	Predicted RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	SLCO1A2	P46721	670 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	GDF10	P55107	478 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	GEMIN4	P57678	1058 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	FAM189B	P81408	668 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	BFSP2	Q13515	415 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	TPSAB1	Q15661	275 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	HEATR6	Q6AI08	1181 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	PM20D1	Q6GTS8	502 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	OVOS1	Q6IE37	1185 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	EXOC3L1	Q86VI1	746 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	RNF169	Q8NCN4	708 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	UHMK1	Q8TAS1	419 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CLEC4C	Q8WTT0	213 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	TFB1M	Q8WVM0	346 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	APBB2	Q92870	758 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CHMP6	Q96FZ7	201 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	SGSM3	Q96HU1	749 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	DEFB118	Q96PH6	123 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CCT8L2	Q96SF2	557 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	KCTD15	Q96SI1	283 aa	Predicted RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	ULBP1	Q9BZM6	244 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	USP29	Q9HBJ7	922 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	XAB2	Q9HCS7	855 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	SSU72	Q9NP77	194 aa	Known RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	STARD7	Q9NQZ5	370 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	RNF19A	Q9NV58	838 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	SAE1	Q9UBE0	346 aa	Predicted RBP	13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	RSPH14	Q9UHP6	348 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	HEY1	Q9Y5J3	304 aa		13.69	□□□□□ -0.22
NDRG1-222	ENST00000522476	CLUH	O75153	1309 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	MYBPHL	A2RUH7	354 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	MEIS3P2	A8K0S8	358 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	KBTBD13	C9JR72	458 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	HOXA2	O43364	376 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	MGEA5	O60502	916 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	POMC	P01189	267 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	STX2	P32856	288 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	IFI35	P80217	286 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	KCNJ11	Q14654	390 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	PAFAH1B3	Q15102	231 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	NFE2	Q16621	373 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	CA9	Q16790	459 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	CCNJL	Q8IV13	435 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	CCDC13	Q8IYE1	715 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	ADAMTS19	Q8TE59	1207 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	ZNF473	Q8WTR7	871 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	DYDC1	Q8WWB3	177 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	MYLPF	Q96A32	169 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	ALKBH8	Q96BT7	664 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	FAM193B	Q96PV7	902 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	CYTH2	Q99418	400 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	SMO	Q99835	787 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	LPIN3	Q9BQK8	851 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	ACSS3	Q9H6R3	686 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	LRRC4C	Q9HCJ2	640 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	PPAN	Q9NQ55	473 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	RAB6B	Q9NRW1	208 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	TRMT13	Q9NUP7	481 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	DNAJC17	Q9NVM6	304 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	GPATCH2L	Q9NWQ4	482 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	PHF24	Q9UPV7	400 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	NAALADL1	Q9UQQ1	740 aa		13.68	□□□□□ -0.22
NDRG1-222	ENST00000522476	ALPK3	Q96L96	1907 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	ARVCF	O00192	962 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	EEF2K	O00418	725 aa	Known RBP	13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	CLDN5	O00501	218 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	TRDMT1	O14717	391 aa	Known RBP	13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	SYN3	O14994	580 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	OPHN1	O60890	802 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	KIAA0754	O94854	1291 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	PARN	O95453	639 aa	Known RBP	13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	MLN	P12872	115 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	BRAF	P15056	766 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	MX2	P20592	715 aa		13.67	□□□□□ -0.22
NDRG1-222	ENST00000522476	RBL1	P28749	1068 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms