RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CALR3Q96L12 384 aaKnown RBP25.15■■□□□ 1.62
PVT1-212ENST00000521951 C5orf42Q9H799 3197 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 USP27XA6NNY8 438 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 RNF8O76064 485 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 RDXP35241 583 aaKnown RBP25.14■■□□□ 1.62
PVT1-212ENST00000521951 CXCR3P49682 368 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 KCNQ1P51787 676 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 KPNA1P52294 538 aaPredicted RBP25.14■■□□□ 1.62
PVT1-212ENST00000521951 HDAC4P56524 1084 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 CPNE8Q86YQ8 564 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 KIAA1524Q8TCG1 905 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 FCRL2Q96LA5 508 aaPredicted RBP25.14■■□□□ 1.62
PVT1-212ENST00000521951 USTQ9Y2C2 406 aa25.14■■□□□ 1.62
PVT1-212ENST00000521951 IGLV3-27P01718 113 aa25.13■■□□□ 1.61
PVT1-212ENST00000521951 IFI16Q16666 785 aaKnown RBP25.13■■□□□ 1.61
PVT1-212ENST00000521951 ZC3H12AQ5D1E8 599 aaKnown RBP25.13■■□□□ 1.61
PVT1-212ENST00000521951 DAB2IPQ5VWQ8 1189 aa25.13■■□□□ 1.61
PVT1-212ENST00000521951 SND1Q7KZF4 910 aaKnown RBP eCLIP25.13■■□□□ 1.61
PVT1-212ENST00000521951 WBP2Q969T9 261 aa25.13■■□□□ 1.61
PVT1-212ENST00000521951 PHF7Q9BWX1 381 aaPredicted RBP25.13■■□□□ 1.61
PVT1-212ENST00000521951 TRPV4Q9HBA0 871 aa25.13■■□□□ 1.61
PVT1-212ENST00000521951 LEFTY2O00292 366 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 LRCH4O75427 683 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 STC2O76061 302 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 IRF1P10914 325 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 SP100P23497 879 aaPredicted RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 RING1Q06587 406 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 CC2D1AQ6P1N0 951 aaPredicted RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 SH3RF2Q8TEC5 729 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 RNF34Q969K3 372 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 PLD4Q96BZ4 506 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 ACSF2Q96CM8 615 aaPredicted RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 TMEM51Q9NW97 253 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 FAM50BQ9Y247 325 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 MAN1A1P33908 653 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 DEKP35659 375 aaKnown RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 VIPR2P41587 438 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 FAM131BQ86XD5 332 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 CELF5Q8N6W0 485 aaKnown RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 GOLPH3Q9H4A6 298 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.12■■□□□ 1.61
PVT1-212ENST00000521951 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.12■■□□□ 1.61
PVT1-212ENST00000521951 CFAP97Q9P2B7 532 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 THEGQ9P2T0 379 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 EPS15L1Q9UBC2 864 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 ZKSCAN5Q9Y2L8 839 aa25.12■■□□□ 1.61
PVT1-212ENST00000521951 GRID2IPA4D2P6 1211 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 IL9P15248 144 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 TCF3P15923 654 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 FCARP24071 287 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 MIPP30301 263 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 CCR1P32246 355 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 PCK1P35558 622 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 PPP2R5DQ14738 602 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 C11orf63Q6NUN7 778 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 SCYL2Q6P3W7 929 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 DAAM2Q86T65 1068 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 DDX42Q86XP3 938 aaKnown RBP eCLIP25.11■■□□□ 1.61
PVT1-212ENST00000521951 TTC16Q8NEE8 873 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 ST13P5Q8NFI4 369 aaPredicted RBP25.11■■□□□ 1.61
PVT1-212ENST00000521951 RIN3Q8TB24 985 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 RSPRY1Q96DX4 576 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 NCAPGQ9BPX3 1015 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 WDCPQ9H6R7 721 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 KIF9Q9HAQ2 790 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 KCND1Q9NSA2 647 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 ALG6Q9Y672 507 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 CAPN6Q9Y6Q1 641 aa25.11■■□□□ 1.61
PVT1-212ENST00000521951 KCNU1A8MYU2 1149 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 C2CD4DB7Z1M9 353 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 BRMS1LQ5PSV4 323 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 NUGGCQ68CJ6 796 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 TANGO2Q6ICL3 276 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 C17orf53Q8N3J3 647 aaPredicted RBP25.1■■□□□ 1.61
PVT1-212ENST00000521951 LRRC57Q8N9N7 239 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 LRRC3BQ96PB8 259 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 PCSK1NQ9UHG2 260 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 HYOU1Q9Y4L1 999 aa25.1■■□□□ 1.61
PVT1-212ENST00000521951 GREM1O60565 184 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 PALMO75781 387 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 KLKB1P03952 638 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 SLC2A3P11169 496 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 TCF4P15884 667 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 COMTP21964 271 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 SLC1A1P43005 524 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 USP4Q13107 963 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 ZNF77Q15935 545 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 UNC45BQ8IWX7 931 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 TDRD5Q8NAT2 981 aaKnown RBP25.09■■□□□ 1.61
PVT1-212ENST00000521951 RPGRIP1Q96KN7 1286 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 IRX2Q9BZI1 471 aaPredicted RBP25.09■■□□□ 1.61
PVT1-212ENST00000521951 TKTL2Q9H0I9 626 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 ZFP14Q9HCL3 533 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 ANLNQ9NQW6 1124 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 ARHGEF38Q9NXL2 777 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 SH3BP1Q9Y3L3 701 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 NR2E1Q9Y466 385 aa25.09■■□□□ 1.61
PVT1-212ENST00000521951 GOLGA6L9A6NEM1 432 aa25.08■■□□□ 1.61
PVT1-212ENST00000521951 APOEP02649 317 aa25.08■■□□□ 1.61
PVT1-212ENST00000521951 CORO1AP31146 461 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms