RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 GFRA2O00451 464 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 TM4SF5O14894 197 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 AP5Z1O43299 807 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 ZNF217O75362 1048 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 NDUFV2P19404 249 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 BRD2P25440 801 aaKnown RBP16.54■□□□□ 0.24
CLN8-205ENST00000520991 DPP6P42658 865 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 PTGER3P43115 390 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 RGS7P49802 495 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 MFAP3P55082 362 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 STARD3Q14849 445 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 STILQ15468 1287 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 PKDCCQ504Y2 493 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 SPDYCQ5MJ68 293 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 KIAA1211LQ6NV74 962 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 RRAGAQ7L523 313 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 ANKS1BQ7Z6G8 1248 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 SYT12Q8IV01 421 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 CPXM2Q8N436 756 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 RBBP8NLQ8NC74 664 aaPredicted RBP16.54■□□□□ 0.24
CLN8-205ENST00000520991 UCMAQ8WVF2 138 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 P2RY11Q96G91 374 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 SFMBT1Q9UHJ3 866 aa16.54■□□□□ 0.24
CLN8-205ENST00000520991 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLN8-205ENST00000520991 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
CLN8-205ENST00000520991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLN8-205ENST00000520991 PLXND1Q9Y4D7 1925 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 C4orf47A7E2U8 309 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 PIK3R2O00459 728 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 FGFR1OPO95684 399 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 AFPP02771 609 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 DAOAP59103 153 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 GCNT1Q02742 428 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 KCNH2Q12809 1159 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 E2F5Q15329 346 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 TRIP4Q15650 581 aaPredicted RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 CNGA2Q16280 664 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 GEN1Q17RS7 908 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 LMO3Q8TAP4 145 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 SLC35F5Q8WV83 523 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 GOLGA1Q92805 767 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 NUSAP1Q9BXS6 441 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 TMEM9BQ9NQ34 198 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 CYP8B1Q9UNU6 501 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 STON1Q9Y6Q2 735 aa16.53■□□□□ 0.24
CLN8-205ENST00000520991 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
CLN8-205ENST00000520991 RNF225M0QZC1 329 aaPredicted RBP16.52■□□□□ 0.24
CLN8-205ENST00000520991 NPC1O15118 1278 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 MSI1O43347 362 aaKnown RBP16.52■□□□□ 0.24
CLN8-205ENST00000520991 KRT5P13647 590 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 IRX4P78413 519 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 ARID5AQ03989 594 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 MPPE1Q53F39 396 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 PMF1Q6P1K2 205 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 KIAA1324Q6UXG2 1013 aaKnown RBP16.52■□□□□ 0.24
CLN8-205ENST00000520991 FAM217AQ8IXS0 508 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 SCML4Q8N228 414 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 DEFB119Q8N690 84 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 EHBP1Q8NDI1 1231 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 IRGQQ8WZA9 623 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 CIPCQ9C0C6 399 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 INTS2Q9H0H0 1204 aaKnown RBP16.52■□□□□ 0.24
CLN8-205ENST00000520991 CD248Q9HCU0 757 aa16.52■□□□□ 0.24
CLN8-205ENST00000520991 EVLQ9UI08 416 aaPredicted RBP16.52■□□□□ 0.24
CLN8-205ENST00000520991 IGHV1OR15-9A0A0B4J2B8 117 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 WASH3PC4AMC7 463 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 SYNCRIPO60506 623 aaKnown RBP16.51■□□□□ 0.23
CLN8-205ENST00000520991 TSPAN3O60637 253 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 CALCAP01258 141 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 ITPKAP23677 461 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
CLN8-205ENST00000520991 ZNF445P59923 1031 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 LMAN2Q12907 356 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 EIF4HQ15056 248 aaKnown RBP16.51■□□□□ 0.23
CLN8-205ENST00000520991 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 PIWIL1Q96J94 861 aaKnown RBP16.51■□□□□ 0.23
CLN8-205ENST00000520991 MRGPRX1Q96LB2 322 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 HSFY1Q96LI6 401 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 ZSWIM1Q9BR11 485 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 SLC6A17Q9H1V8 727 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 ELOVL2Q9NXB9 296 aa16.51■□□□□ 0.23
CLN8-205ENST00000520991 NDUFS2O75306 463 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 FBXO21O94952 628 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 KCNK5O95279 499 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 LATS1O95835 1130 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 LTFP02788 710 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 CFIP05156 583 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 HOXD12P35452 270 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 IL12RB1P42701 662 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 ZNF132P52740 706 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 UBE2HP62256 183 aa16.5■□□□□ 0.23
CLN8-205ENST00000520991 CAMK4Q16566 473 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms