RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SMAD4Q13485 552 aaKnown RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 RAB33AQ14088 237 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 STILQ15468 1287 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SLC39A12Q504Y0 691 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ARHGAP15Q53QZ3 475 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 TCP11X2Q5H9J9 407 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SNAP47Q5SQN1 464 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CYP4A22Q5TCH4 519 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 WSCD1Q658N2 575 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SLC8B1Q6J4K2 584 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 C15orf39Q6ZRI6 1047 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 PALB2Q86YC2 1186 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 TRIM59Q8IWR1 403 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 PDCL2Q8N4E4 241 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 GOLM1Q8NBJ4 401 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF397Q8NF99 534 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 NEK11Q8NG66 645 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF461Q8TAF7 563 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 AUTS2Q8WXX7 1259 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SMG7Q92540 1137 aaKnown RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SLC35C1Q96A29 364 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 JAKMIP2Q96AA8 810 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ACSF2Q96CM8 615 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 COX4I2Q96KJ9 171 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SEPT5Q99719 369 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 SPON2Q9BUD6 331 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 NDST4Q9H3R1 872 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 HSFX1Q9UBD0 423 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CACNG4Q9UBN1 327 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 FBXL5Q9UKA1 691 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 FBXW11Q9UKB1 542 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ASB3Q9Y575 518 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 TIMM13Q9Y5L4 95 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ST14Q9Y5Y6 855 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 MYO9BQ13459 2157 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 FAM221AA4D161 298 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF503-AS2A6NEH8 195 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 LRRC10BA6NIK2 292 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 HIDE1A8MVS5 230 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 TGM5O43548 720 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 B4GALT3O60512 393 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PGRP06401 933 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 CSH1P0DML2 217 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 CSH2P0DML3 217 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ATF2P15336 505 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 USP8P40818 1118 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 CLCN4P51793 760 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 MRPS5P82675 430 aaKnown RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 GCNT1Q02742 428 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 UBXN1Q04323 297 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PPP3CAQ08209 521 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ADCY1Q08828 1119 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 HYAL1Q12794 435 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 LRMPQ12912 555 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 GPR17Q13304 367 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 CUL2Q13617 745 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 RAPGEF1Q13905 1077 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 TRIM14Q14142 442 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 HSP90AA4PQ58FG1 418 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 RARS2Q5T160 578 aaKnown RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ANKRD54Q6NXT1 300 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 VSTM1Q6UX27 236 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 BNC2Q6ZN30 1099 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 C11orf57Q6ZUT1 292 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PDZD4Q76G19 769 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ADGRD2Q7Z7M1 963 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SCN4BQ8IWT1 228 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 B3GALNT2Q8NCR0 500 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 LNX1Q8TBB1 728 aaPredicted RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SLC7A14Q8TBB6 771 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 TAS1R2Q8TE23 839 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ATXN2LQ8WWM7 1075 aaKnown RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 GOLGA1Q92805 767 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SMARCD1Q96GM5 515 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 B3GALT6Q96L58 329 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 CEP295NLQ96MC4 621 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 PGLYRP2Q96PD5 576 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SLITRK1Q96PX8 696 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SLC38A3Q99624 504 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 MIS12Q9H081 205 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 INTS2Q9H0H0 1204 aaKnown RBP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 VPS16Q9H269 839 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 SLITRK6Q9H5Y7 841 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 ASAH2Q9NR71 780 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 FANCLQ9NW38 375 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 TAB2Q9NYJ8 693 aa6.28□□□□□ -1.4
FAM49B-218ENST00000520887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.28□□□□□ -1.4
FAM49B-218ENST00000520887 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms