RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ACTL9Q8TC94 416 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SNF8Q96H20 258 aa15.06■□□□□ 0
CLN8-204ENST00000519254 TBCBQ99426 244 aa15.06■□□□□ 0
CLN8-204ENST00000519254 NCAPGQ9BPX3 1015 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
CLN8-204ENST00000519254 CALN1Q9BXU9 219 aa15.06■□□□□ 0
CLN8-204ENST00000519254 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
CLN8-204ENST00000519254 GPATCH2LQ9NWQ4 482 aa15.06■□□□□ 0
CLN8-204ENST00000519254 CALCOCO1Q9P1Z2 691 aa15.06■□□□□ 0
CLN8-204ENST00000519254 PLAAQ9Y263 795 aa15.06■□□□□ 0
CLN8-204ENST00000519254 NFS1Q9Y697 457 aa15.06■□□□□ 0
CLN8-204ENST00000519254 YJEFN3A6XGL0 299 aa15.05■□□□□ -0
CLN8-204ENST00000519254 E7ENQ6 273 aa15.05■□□□□ -0
CLN8-204ENST00000519254 TNFRSF10BO14763 440 aa15.05■□□□□ -0
CLN8-204ENST00000519254 LPXNO60711 386 aa15.05■□□□□ -0
CLN8-204ENST00000519254 RNF40O75150 1001 aa15.05■□□□□ -0
CLN8-204ENST00000519254 KRT14P02533 472 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ATF2P15336 505 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ATF6P18850 670 aa15.05■□□□□ -0
CLN8-204ENST00000519254 IL4RP24394 825 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ELF1P32519 619 aa15.05■□□□□ -0
CLN8-204ENST00000519254 IRS1P35568 1242 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ATXN1P54253 815 aaKnown RBP15.05■□□□□ -0
CLN8-204ENST00000519254 ERVK-21P61565 698 aa15.05■□□□□ -0
CLN8-204ENST00000519254 RPL10AP62906 217 aaKnown RBP15.05■□□□□ -0
CLN8-204ENST00000519254 YWHAZP63104 245 aaKnown RBP15.05■□□□□ -0
CLN8-204ENST00000519254 OTUD4Q01804 1114 aaKnown RBP15.05■□□□□ -0
CLN8-204ENST00000519254 UBE3AQ05086 875 aa15.05■□□□□ -0
CLN8-204ENST00000519254 CALCOCO2Q13137 446 aa15.05■□□□□ -0
CLN8-204ENST00000519254 MTMR3Q13615 1198 aa15.05■□□□□ -0
CLN8-204ENST00000519254 PDK2Q15119 407 aa15.05■□□□□ -0
CLN8-204ENST00000519254 CA9Q16790 459 aa15.05■□□□□ -0
CLN8-204ENST00000519254 RFX6Q8HWS3 928 aa15.05■□□□□ -0
CLN8-204ENST00000519254 DEFB106AQ8N104 65 aa15.05■□□□□ -0
CLN8-204ENST00000519254 NUP93Q8N1F7 819 aa15.05■□□□□ -0
CLN8-204ENST00000519254 GLIS1Q8NBF1 620 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ARNTL2Q8WYA1 636 aa15.05■□□□□ -0
CLN8-204ENST00000519254 SAMD11Q96NU1 681 aa15.05■□□□□ -0
CLN8-204ENST00000519254 KLHL5Q96PQ7 755 aa15.05■□□□□ -0
CLN8-204ENST00000519254 EMILIN2Q9BXX0 1053 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ZNF148Q9UQR1 794 aa15.05■□□□□ -0
CLN8-204ENST00000519254 ATP8A1Q9Y2Q0 1164 aa15.05■□□□□ -0
CLN8-204ENST00000519254 C2orf71A6NGG8 1288 aa15.04■□□□□ -0
CLN8-204ENST00000519254 MDM4O15151 490 aa15.04■□□□□ -0
CLN8-204ENST00000519254 DAB1O75553 588 aa15.04■□□□□ -0
CLN8-204ENST00000519254 ITGAVP06756 1048 aa15.04■□□□□ -0
CLN8-204ENST00000519254 ADH1AP07327 375 aa15.04■□□□□ -0
CLN8-204ENST00000519254 DESP17661 470 aa15.04■□□□□ -0
CLN8-204ENST00000519254 ADCY8P40145 1251 aa15.04■□□□□ -0
CLN8-204ENST00000519254 TUFMP49411 452 aaKnown RBP15.04■□□□□ -0
CLN8-204ENST00000519254 GYS2P54840 703 aa15.04■□□□□ -0
CLN8-204ENST00000519254 USP46P62068 366 aa15.04■□□□□ -0
CLN8-204ENST00000519254 DENND5BQ6ZUT9 1274 aa15.04■□□□□ -0
CLN8-204ENST00000519254 GSTA5Q7RTV2 222 aa15.04■□□□□ -0
CLN8-204ENST00000519254 GPR65Q8IYL9 337 aa15.04■□□□□ -0
CLN8-204ENST00000519254 TTC13Q8NBP0 860 aa15.04■□□□□ -0
CLN8-204ENST00000519254 NT5C3BQ969T7 300 aa15.04■□□□□ -0
CLN8-204ENST00000519254 FRMD8P1Q9BZ68 369 aaPredicted RBP15.04■□□□□ -0
CLN8-204ENST00000519254 EPB41L4BQ9H329 900 aa15.04■□□□□ -0
CLN8-204ENST00000519254 SLC28A3Q9HAS3 691 aa15.04■□□□□ -0
CLN8-204ENST00000519254 PCDH18Q9HCL0 1135 aa15.04■□□□□ -0
CLN8-204ENST00000519254 VPS18Q9P253 973 aa15.04■□□□□ -0
CLN8-204ENST00000519254 MTRF1LQ9UGC7 380 aaKnown RBP15.04■□□□□ -0
CLN8-204ENST00000519254 MAGED2Q9UNF1 606 aaPredicted RBP15.04■□□□□ -0
CLN8-204ENST00000519254 YIPF1Q9Y548 306 aa15.04■□□□□ -0
CLN8-204ENST00000519254 MYO16Q9Y6X6 1858 aa15.04■□□□□ -0
CLN8-204ENST00000519254 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
CLN8-204ENST00000519254 CAPN9O14815 690 aa15.03■□□□□ -0
CLN8-204ENST00000519254 TGM5O43548 720 aa15.03■□□□□ -0
CLN8-204ENST00000519254 OPA1O60313 960 aa15.03■□□□□ -0
CLN8-204ENST00000519254 APOC2P02655 101 aa15.03■□□□□ -0
CLN8-204ENST00000519254 LTFP02788 710 aa15.03■□□□□ -0
CLN8-204ENST00000519254 PECAM1P16284 738 aaPredicted RBP15.03■□□□□ -0
CLN8-204ENST00000519254 VPS41P49754 854 aa15.03■□□□□ -0
CLN8-204ENST00000519254 ITGA8P53708 1063 aa15.03■□□□□ -0
CLN8-204ENST00000519254 CAMK1Q14012 370 aa15.03■□□□□ -0
CLN8-204ENST00000519254 SLC25A52Q3SY17 297 aa15.03■□□□□ -0
CLN8-204ENST00000519254 DCAF6Q58WW2 860 aa15.03■□□□□ -0
CLN8-204ENST00000519254 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
CLN8-204ENST00000519254 ERMARDQ5T6L9 678 aa15.03■□□□□ -0
CLN8-204ENST00000519254 OTUD1Q5VV17 481 aaPredicted RBP15.03■□□□□ -0
CLN8-204ENST00000519254 LRIG3Q6UXM1 1119 aa15.03■□□□□ -0
CLN8-204ENST00000519254 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
CLN8-204ENST00000519254 STRADAQ7RTN6 431 aa15.03■□□□□ -0
CLN8-204ENST00000519254 BNIPLQ7Z465 357 aa15.03■□□□□ -0
CLN8-204ENST00000519254 MRPL43Q8N983 215 aaKnown RBP15.03■□□□□ -0
CLN8-204ENST00000519254 CCDC89Q8N998 374 aa15.03■□□□□ -0
CLN8-204ENST00000519254 UBLCP1Q8WVY7 318 aaPredicted RBP15.03■□□□□ -0
CLN8-204ENST00000519254 EDEM1Q92611 657 aa15.03■□□□□ -0
CLN8-204ENST00000519254 ARL8AQ96BM9 186 aa15.03■□□□□ -0
CLN8-204ENST00000519254 RNF157Q96PX1 679 aa15.03■□□□□ -0
CLN8-204ENST00000519254 SLC2A13Q96QE2 648 aa15.03■□□□□ -0
CLN8-204ENST00000519254 RUFY1Q96T51 708 aa15.03■□□□□ -0
CLN8-204ENST00000519254 TMEM121Q9BTD3 319 aa15.03■□□□□ -0
CLN8-204ENST00000519254 USP3Q9Y6I4 520 aa15.03■□□□□ -0
CLN8-204ENST00000519254 H3BNC9 293 aa15.03■□□□□ -0
CLN8-204ENST00000519254 FYNP06241 537 aa15.03■□□□□ -0
CLN8-204ENST00000519254 ZSCAN5DPP0CG00 497 aa15.03■□□□□ -0
CLN8-204ENST00000519254 ETS1P14921 441 aa15.03■□□□□ -0
CLN8-204ENST00000519254 L1CAMP32004 1257 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms