RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 IGSF21Q96ID5 467 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 C8orf48Q96LL4 319 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 DNAJC17Q9NVM6 304 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 PLAAQ9Y263 795 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 SNX10Q9Y5X0 201 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 ZNF487B1APH4 448 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 HSPA1AP0DMV8 641 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 HSPA1BP0DMV9 641 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 DARS2Q6PI48 645 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 CCDC25Q86WR0 208 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 NUP93Q8N1F7 819 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 MTRF1LQ9UGC7 380 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 CDY1Q9Y6F8 540 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 A0A1W2PQH9 124 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 H0YGN5 161 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 WDR5P61964 334 aaKnown RBP24.22■■□□□ 1.47
SLIT3-204ENST00000518140 MFSD5Q6N075 450 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 KCNT2Q6UVM3 1135 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 ANKS3Q6ZW76 656 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 PSTKQ8IV42 348 aaKnown RBP24.22■■□□□ 1.47
SLIT3-204ENST00000518140 TAB3Q8N5C8 712 aaPredicted RBP24.22■■□□□ 1.47
SLIT3-204ENST00000518140 RSAD2Q8WXG1 361 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 SEMA4AQ9H3S1 761 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 NFS1Q9Y697 457 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 H7C0C1 242 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 CREB3O43889 395 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 TGM2P21980 687 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 RPL22P35268 128 aaKnown RBP24.22■■□□□ 1.47
SLIT3-204ENST00000518140 MAGEA11P43364 429 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 ATP5OP48047 213 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 CXCR3P49682 368 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 DUSP4Q13115 394 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 SPOUT1Q5T280 376 aaKnown RBP24.22■■□□□ 1.47
SLIT3-204ENST00000518140 RNF139Q8WU17 664 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 SLC9A7Q96T83 725 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 TMEM106CQ9BVX2 250 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 PCDH9Q9HC56 1237 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 LRRC4CQ9HCJ2 640 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 SFMBT1Q9UHJ3 866 aa24.22■■□□□ 1.47
SLIT3-204ENST00000518140 PATJQ8NI35 1801 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 H7C4K7 107 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 C2CD2LO14523 706 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 CTCFP49711 727 aaPredicted RBP24.21■■□□□ 1.47
SLIT3-204ENST00000518140 PMS2P54278 862 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 ROR1Q01973 937 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 BTBD8Q5XKL5 378 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 HIBCHQ6NVY1 386 aaPredicted RBP24.21■■□□□ 1.47
SLIT3-204ENST00000518140 OTOP2Q7RTS6 562 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 FBXO22Q8NEZ5 403 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 WDCPQ9H6R7 721 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 RC3H2Q9HBD1 1191 aaKnown RBP24.21■■□□□ 1.47
SLIT3-204ENST00000518140 USP29Q9HBJ7 922 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 ARHGEF4Q9NR80 690 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 RRN3Q9NYV6 651 aa24.21■■□□□ 1.47
SLIT3-204ENST00000518140 TRIM66O15016 1216 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 ARL4AP40617 200 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 MTMR3Q13615 1198 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 EFHC2Q5JST6 749 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 NCBP2-AS2Q69YL0 99 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 RNF168Q8IYW5 571 aaPredicted RBP24.2■■□□□ 1.47
SLIT3-204ENST00000518140 CASP10Q92851 521 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 NTAN1Q96AB6 310 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 SEPT5Q99719 369 aaPredicted RBP24.2■■□□□ 1.47
SLIT3-204ENST00000518140 TKTL2Q9H0I9 626 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 ABCC13Q9NSE7 274 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 SCML2Q9UQR0 700 aa24.2■■□□□ 1.47
SLIT3-204ENST00000518140 DNALI1O14645 258 aaPredicted RBP24.2■■□□□ 1.46
SLIT3-204ENST00000518140 IGLV3-25P01717 112 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 EIF4EBP2Q13542 120 aaPredicted RBP24.2■■□□□ 1.46
SLIT3-204ENST00000518140 USP41Q3LFD5 358 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 MGAT5BQ3V5L5 792 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 C16orf59Q7L2K0 433 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 ARL8AQ96BM9 186 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 SH3GL2Q99962 352 aa24.2■■□□□ 1.46
SLIT3-204ENST00000518140 MRPL42Q9Y6G3 142 aaKnown RBP24.2■■□□□ 1.46
SLIT3-204ENST00000518140 COL4A4P53420 1690 aaPredicted RBP24.2■■□□□ 1.46
SLIT3-204ENST00000518140 WDR27A2RRH5 827 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 MSI1O43347 362 aaKnown RBP24.19■■□□□ 1.46
SLIT3-204ENST00000518140 F9P00740 461 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 FAM129AQ9BZQ8 928 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 GMIPQ9P107 970 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 EN2P19622 333 aaPredicted RBP24.19■■□□□ 1.46
SLIT3-204ENST00000518140 RBL1P28749 1068 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 OR1D2P34982 312 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 SCAPQ12770 1279 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 SEMA3BQ13214 749 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 LRRC31Q6UY01 552 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 BEND5Q7L4P6 421 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 TMEM199Q8N511 208 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 CCHCR1Q8TD31 782 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 DTLQ9NZJ0 730 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 TPX2Q9ULW0 747 aaKnown RBP24.19■■□□□ 1.46
SLIT3-204ENST00000518140 NR2E3Q9Y5X4 410 aa24.19■■□□□ 1.46
SLIT3-204ENST00000518140 HAPLN1P10915 354 aaPredicted RBP24.18■■□□□ 1.46
SLIT3-204ENST00000518140 BTG3Q14201 252 aaPredicted RBP24.18■■□□□ 1.46
SLIT3-204ENST00000518140 SRLQ86TD4 932 aa24.18■■□□□ 1.46
SLIT3-204ENST00000518140 PABPC3Q9H361 631 aaKnown RBP24.18■■□□□ 1.46
SLIT3-204ENST00000518140 IL37Q9NZH6 218 aa24.18■■□□□ 1.46
SLIT3-204ENST00000518140 RCOR3Q9P2K3 495 aaPredicted RBP24.18■■□□□ 1.46
SLIT3-204ENST00000518140 MTRRQ9UBK8 725 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms