RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DUSP15Q9H1R2 295 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PABPC3Q9H361 631 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CUEDC2Q9H467 287 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF696Q9H7X3 374 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 C17orf75Q9HAS0 396 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 USP29Q9HBJ7 922 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 OLFML3Q9NRN5 406 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MRGBPQ9NV56 204 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDX18Q9NVP1 670 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANKMY1Q9P2S6 941 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ASIC3Q9UHC3 531 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TBK1Q9UHD2 729 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANAPC5Q9UJX4 755 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAB26Q9ULW5 256 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS4AQ9UN37 437 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SNX7Q9UNH6 387 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAPRE3Q9UPY8 281 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 HPSEQ9Y251 543 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SBNO2Q9Y2G9 1366 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ARHGEF5Q12774 1597 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TTC37Q6PGP7 1564 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CUL7Q14999 1698 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADGRA3Q8IWK6 1321 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 USP42Q9H9J4 1324 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF532Q9HCE3 1301 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TUBGCP6Q96RT7 1819 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYH7BA7E2Y1 1941 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 IQGAP1P46940 1657 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYOM1P52179 1685 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 A0A1W2PQJ5 194 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM170AA1A519 330 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PTPDC1A2A3K4 754 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC22A31A6NKX4 558 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 EIF4E1BA6NMX2 242 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 A8MUI8 341 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TCP11X1B4DZS4 312 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RNF103O00237 685 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 VWA5AO00534 786 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KPNA5O15131 536 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SHOXO15266 292 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGEB2O15479 319 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PJA2O43164 708 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ITM2AO43736 263 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SCO2O43819 266 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 NOL3O60936 208 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SRGAP2O75044 1071 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRN2O75325 713 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAFO75444 373 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SERPINI2O75830 405 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RSL1D1O76021 490 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDHD2O94830 711 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PLEKHA8P1O95397 391 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 IFNA14P01570 189 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 HLA-DRAP01903 254 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 GYPCP04921 128 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM253P0C7T8 217 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYBP10242 640 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SRFP11831 508 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 COL6A2P12110 1019 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT13P13646 458 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ETS2P15036 469 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANPEPP15144 967 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAC2P15153 192 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNA6P17658 529 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 BTF3P20290 206 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 GLDCP23378 1020 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 VAMP1P23763 118 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TYK2P29597 1187 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 STX2P32856 288 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 EVI2BP34910 448 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRHRP34981 398 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PSMC2P35998 433 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ETFBP38117 255 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADCY8P40145 1251 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 STAT3P40763 770 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRCPP42785 496 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RXRGP48443 463 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC9A3P48764 834 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCR3P51677 355 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC18A1P54219 525 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 P2RX3P56373 397 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RACK1P63244 317 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADAM17P78536 824 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 FOLH1Q04609 750 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT17Q04695 432 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 COASYQ13057 564 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SNX17Q15036 470 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PDK3Q15120 406 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TTF1Q15361 905 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 STK11Q15831 433 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNA10Q16322 511 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 USP41Q3LFD5 358 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNAL1Q4LDG9 190 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC58Q4VC31 144 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KHDC1Q4VXA5 237 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZC2HC1CQ53FD0 456 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms