RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 TNFRSF10BO14763 440 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TGFB1I1O43294 461 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 EXOC3O60645 756 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 PPP6R2O75170 966 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 CEACAM1P13688 526 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ATICP31939 592 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 P2RY2P41231 377 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 DPP6P42658 865 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TNFRSF4P43489 277 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 MYL6P60660 151 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 BIRC3Q13489 604 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ANO4Q32M45 955 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZNF699Q32M78 642 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZNF667Q5HYK9 610 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 LY6G5CQ5SRR4 150 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 RHBDF2Q6PJF5 856 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 UNQ6494/PRO21346Q6UXR6 183 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 UNC13DQ70J99 1090 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TMEFF1Q8IYR6 380 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZNF513Q8N8E2 541 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 OLIG1Q8TAK6 271 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 SCFD1Q8WVM8 642 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 HMGB4Q8WW32 186 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TNIP3Q96KP6 325 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 B3GNT5Q9BYG0 378 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 MAGEF1Q9HAY2 307 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZDHHC4Q9NPG8 344 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 CHORDC1Q9UHD1 332 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 EVLQ9UI08 416 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 NME7Q9Y5B8 376 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 CKAP5Q14008 2032 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 DMXL2Q8TDJ6 3036 aa9.42□□□□□ -0.9
CDC42SE2-212ENST00000515533 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 AP5Z1O43299 807 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 COCHO43405 550 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 CUTAO60888 179 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 TULP3O75386 442 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 YEATS4O95619 227 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 PROS1P07225 676 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 IRF1P10914 325 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 P4HA1P13674 534 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 HNRNPLP14866 589 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 TRIM21P19474 475 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 CSRP1P21291 193 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 KIR2DL1P43626 348 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 MAPK8P45983 427 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 TUBP50607 506 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 AP3M2P53677 418 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SLC5A3P53794 718 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 ATXN3P54252 364 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 IRX4P78413 519 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 MESP2Q0VG99 397 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 TMCO4Q5TGY1 634 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 LYSMD4Q5XG99 296 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 CNNM4Q6P4Q7 775 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SCARA5Q6ZMJ2 495 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 FAM35AQ86V20 835 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 NAT16Q8N8M0 369 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 C1orf216Q8TAB5 229 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SCAMP5Q8TAC9 235 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 XYLT2Q9H1B5 865 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SLC32A1Q9H598 525 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 CCSER2Q9H7U1 834 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 DEC1Q9P2X7 70 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 GOLGA4Q13439 2230 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZFYVE26Q68DK2 2539 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 LAMA5O15230 3695 aa9.41□□□□□ -0.9
CDC42SE2-212ENST00000515533 ACACAQ13085 2346 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 TMEM131Q92545 1883 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 PKD1L2Q7Z442 2459 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 ATXN2Q99700 1313 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 A0A0A0MRY4 1105 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 HOXC11O43248 304 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 LZTS3O60299 673 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 TLR5O60602 858 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 CFIP05156 583 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 C1QTNF9P0C862 333 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 HOXB2P14652 356 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 ENGP17813 658 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms