RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 KYNUQ16719 465 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ZPBP2Q6X784 338 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 MAEAQ7L5Y9 396 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 NLRP9Q7RTR0 991 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ANKRD13BQ86YJ7 626 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 GPIHBP1Q8IV16 184 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 RAVER1Q8IY67 606 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 MCOLN2Q8IZK6 566 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 NAT14Q8WUY8 206 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 GAB3Q8WWW8 586 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 KAT5Q92993 513 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 VCPIP1Q96JH7 1222 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 UHRF1Q96T88 793 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 YIPF3Q9GZM5 350 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TRPV6Q9H1D0 765 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 VRTNQ9H8Y1 702 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 UBAP1Q9NZ09 502 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PTTG2Q9NZH5 202 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CNOT11Q9UKZ1 510 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PCDHGB4Q9UN71 923 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 SHOC2Q9UQ13 582 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PCDHGB5Q9Y5G0 923 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TEX264Q9Y6I9 313 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM43BA6NCK2 446 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 INPPL1O15357 1258 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 GPR32O75388 356 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 FAM13AO94988 1023 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ECEL1O95672 775 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ANPEPP15144 967 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TAS2R40P59535 323 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 GCNT1Q02742 428 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 DNAJC3Q13217 504 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MORF4L2Q15014 288 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 LRIT3Q3SXY7 679 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TIFABQ6ZNK6 161 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLC47A2Q86VL8 602 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 EXD1Q8NHP7 514 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 GLMNQ92990 594 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM43Q96BQ3 446 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLC39A13Q96H72 371 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 NDNQ99608 321 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM7Q9C029 511 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 POLR3FQ9H1D9 316 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PRO3102Q9H379 93 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM206Q9H813 350 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PARVGQ9HBI0 331 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PRDM5Q9NQX1 630 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 INIPQ9NRY2 104 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TRMT13Q9NUP7 481 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 CHCHD3Q9NX63 227 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF180Q9UJW8 692 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ADAMTS6Q9UKP5 1117 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF623O75123 536 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 CDK4P11802 303 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PRKCHP24723 683 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 KCNJ1P48048 391 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ATP11AP98196 1134 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 DYNC1I2Q13409 638 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF618Q5T7W0 954 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 Q6ZNX1 250 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 RAPH1Q70E73 1250 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 DEPTORQ8TB45 409 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MAIP1Q8WWC4 291 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 BTBD9Q96Q07 612 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 LRRC37BQ96QE4 947 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MRPL9Q9BYD2 267 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TSPYL2Q9H2G4 693 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 BHMT2Q9H2M3 363 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 C10orf88Q9H8K7 445 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 RGS18Q9NS28 235 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLC7A8Q9UHI5 535 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 TRIP12Q14669 1992 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZC3H11AO75152 810 aaKnown RBP eCLIP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PROSCO94903 275 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 KRT18P05783 430 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 CYP4A11Q02928 519 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLC25A11Q02978 314 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 LAMTOR4Q0VGL1 99 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 WASHC5Q12768 1159 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 KCNJ11Q14654 390 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF423Q2M1K9 1284 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 NOTUMQ6P988 496 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF534Q76KX8 674 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 DNAJB3Q8WWF6 145 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 DNAAF2Q9NVR5 837 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MTMR10Q9NXD2 777 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 RIMS3Q9UJD0 308 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PPM1HQ9ULR3 514 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 PCDHA11Q9Y5I1 949 aa7.68□□□□□ -1.18
CLIP1-205ENST00000514271 MRPL42Q9Y6G3 142 aaKnown RBP7.68□□□□□ -1.18
CLIP1-205ENST00000514271 A0A0J9YVX5 310 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 H0YJX3 145 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 CCDC22O60826 627 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 C8BP07358 591 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms