RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PMS2P1A4D2B8 440 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 USP12O75317 370 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 TBX18O95935 607 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 ACP1P24666 158 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 YWHAQP27348 245 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 GJB2P29033 226 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 SLC12A3P55017 1021 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 MFAP3P55082 362 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 RACK1P63244 317 aaKnown RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 ARL13BQ3SXY8 428 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 MDH1BQ5I0G3 518 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 TMEM215Q68D42 235 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 ADALQ6DHV7 355 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 SCAMP5Q8TAC9 235 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 FBXO32Q969P5 355 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 SLITRK1Q96PX8 696 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 FIZ1Q96SL8 496 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 PLIN2Q99541 437 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 ACE2Q9BYF1 805 aaPredicted RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 ZNF518BQ9C0D4 1074 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 POLR1BQ9H9Y6 1135 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 AGO2Q9UKV8 859 aaKnown RBP9.64□□□□□ -0.87
NUP54-211ENST00000512151 CLEC4EQ9ULY5 219 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 SLC27A6Q9Y2P4 619 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 ITPR2Q14571 2701 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 CACNA1DQ01668 2161 aa9.64□□□□□ -0.87
NUP54-211ENST00000512151 A0A1W2PR77 199 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ENO4A6NNW6 628 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 H0YCG3 227 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 K7ENM7 598 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CLDN5O00501 218 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 TRIM38O00635 465 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 EPHX1P07099 455 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ZNF132P52740 706 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 BCAT1P54687 386 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CDH8P55286 799 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 GUCY1B3Q02153 619 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 TTC38Q5R3I4 469 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 SNX30Q5VWJ9 437 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CCDC81Q6ZN84 652 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 LRRC52Q8N7C0 313 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ZNF366Q8N895 744 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 SYT2Q8N9I0 419 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 MYCBPAPQ8TBZ2 947 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 EXTL1Q92935 676 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 PIWIL1Q96J94 861 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 EHD2Q9NZN4 543 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 STYXL1Q9Y6J8 313 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 KIF26BQ2KJY2 2108 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 A0A1W2PPC4 97 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 BLACEA4D250 179 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 CSO75390 466 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 RPS14P62263 151 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 CLN3Q13286 438 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 BECN1Q14457 450 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 IGFBP7Q16270 282 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 KIAA0895LQ68EN5 471 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 Q6ZNB5 142 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 LSMEM2Q8N112 164 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 NUP93Q8N1F7 819 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 OVCA2Q8WZ82 227 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 MMS19Q96T76 1030 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 REEP2Q9BRK0 252 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 B3GNT5Q9BYG0 378 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 BTBD1Q9H0C5 482 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 DPEP3Q9H4B8 488 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 CAAP1Q9H8G2 361 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ELOVL2Q9NXB9 296 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 SMC3Q9UQE7 1217 aa9.63□□□□□ -0.87
NUP54-211ENST00000512151 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
NUP54-211ENST00000512151 NPC1O15118 1278 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 SIGLEC6O43699 453 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 OPA1O60313 960 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 IL18RAPO95256 599 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 PENKP01210 267 aaPredicted RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 KRT19P08727 400 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 PLA2G4BP0C869 781 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 WARSP23381 471 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 TUBP50607 506 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 NXPH1P58417 271 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 HMGN5P82970 282 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 E2F1Q01094 437 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 SRSF6Q13247 344 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 ORC2Q13416 577 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms