RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	TXNRD3NB	Q6F5E7	133 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	NADSYN1	Q6IA69	706 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107		Q6ZNB5	142 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	RNF139	Q8WU17	664 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	KCNK12	Q9HB15	430 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	WNT6	Q9Y6F9	365 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	MYOF	Q9NZM1	2061 aa		15.16	■□□□□ 0.02
MATR3-238	ENST00000512107	OTOL1	A6NHN0	477 aa	Predicted RBP	15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	KCNU1	A8MYU2	1149 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ARHGAP6	O43182	974 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	PTMA	P06454	111 aa	Known RBP	15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ARSA	P15289	507 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	TCF3	P15923	654 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	PFKL	P17858	780 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	GGCX	P38435	758 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	PTPN9	P43378	593 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	SGSH	P51688	502 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	VAV2	P52735	878 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ZNF143	P52747	638 aa	Predicted RBP	15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	TBX4	P57082	545 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	SNX16	P57768	344 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	TCEAL1	Q15170	157 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	BBS7	Q8IWZ6	715 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	CCDC185	Q8N715	623 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	CCDC112	Q8NEF3	446 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ZNF564	Q8TBZ8	553 aa	Predicted RBP	15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	FAM172A	Q8WUF8	416 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ELSPBP1	Q96BH3	223 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	TRIM11	Q96F44	468 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	FAM204A	Q9H8W3	233 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ZFP14	Q9HCL3	533 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	DDIT4	Q9NX09	232 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	ANAPC7	Q9UJX3	599 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	AGO1	Q9UL18	857 aa	Known RBP	15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	INTU	Q9ULD6	942 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	HYOU1	Q9Y4L1	999 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	PAXBP1	Q9Y5B6	917 aa		15.15	■□□□□ 0.02
MATR3-238	ENST00000512107	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	15.15	■□□□□ 0.02	3e-9	■■■□□ 15.1
MATR3-238	ENST00000512107	ARNTL	O00327	626 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	TRDMT1	O14717	391 aa	Known RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	ECI2	O75521	394 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	MTA2	O94776	668 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	PSMA2	P25787	234 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	IL1R2	P27930	398 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CORO1A	P31146	461 aa	Known RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	SLC6A4	P31645	630 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CXCR3	P49682	368 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	VCP	P55072	806 aa	Known RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	TAS2R40	P59535	323 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	TNK2	Q07912	1038 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	SPA17	Q15506	151 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	PPP1R2P3	Q6NXS1	205 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	DCUN1D2	Q6PH85	259 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	C14orf80	Q86SX3	495 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	FAM131B	Q86XD5	332 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	SLC44A3	Q8N4M1	653 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CELF5	Q8N6W0	485 aa	Known RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	GOLGA1	Q92805	767 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CHFR	Q96EP1	664 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	PGAP3	Q96FM1	320 aa	Predicted RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	NACA2	Q9H009	215 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	HPS4	Q9NQG7	708 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	OLA1	Q9NTK5	396 aa	Known RBP	15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	CTTNBP2NL	Q9P2B4	639 aa		15.14	■□□□□ 0.01
MATR3-238	ENST00000512107	TICRR	Q7Z2Z1	1910 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	USP27X	A6NNY8	438 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	TMEM110-MUSTN1	A8MSY1	372 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	GFRA2	O00451	464 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	BUB1	O43683	1085 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	SDC4	P31431	198 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	IRAK1	P51617	712 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	DEUP1	Q05D60	604 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	GAB4	Q2WGN9	574 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	FAM133B	Q5BKY9	247 aa	Known RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	C10orf76	Q5T2E6	689 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	PIK3R6	Q5UE93	754 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	NAIF1	Q69YI7	327 aa	Predicted RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	HTR3D	Q70Z44	454 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	DENND1C	Q8IV53	801 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	REXO1L1P	Q8IX06	675 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	C17orf53	Q8N3J3	647 aa	Predicted RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	TTC8	Q8TAM2	541 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	BPIFB1	Q8TDL5	484 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	RFFL	Q8WZ73	363 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	ANP32B	Q92688	251 aa	Known RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	ACSF2	Q96CM8	615 aa	Predicted RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	FAM83C	Q9BQN1	747 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	CNPY3	Q9BT09	278 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	GPATCH2L	Q9NWQ4	482 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	ARHGEF38	Q9NXL2	777 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	TLR6	Q9Y2C9	796 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	HBS1L	Q9Y450	684 aa	Known RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	NR2E1	Q9Y466	385 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	SCIN	Q9Y6U3	715 aa		15.13	■□□□□ 0.01
MATR3-238	ENST00000512107	SHISA7	A6NL88	538 aa		15.12	■□□□□ 0.01
MATR3-238	ENST00000512107	BUB1B	O60566	1050 aa	Predicted RBP	15.12	■□□□□ 0.01
MATR3-238	ENST00000512107	LRCH4	O75427	683 aa		15.12	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms