RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SNF8Q96H20 258 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 KCTD15Q96SI1 283 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-209ENST00000511426 FMO2Q99518 471 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 FOXP3Q9BZS1 431 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 RAB6CQ9H0N0 254 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 OSBPL2Q9H1P3 480 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 PCDH9Q9HC56 1237 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 ARHGEF38Q9NXL2 777 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 CALCOCO1Q9P1Z2 691 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 SLC4A7Q9Y6M7 1214 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 ESYT3A0FGR9 886 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 SMAPO00193 183 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 CTSAP10619 480 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 ECHS1P30084 290 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 PPP3CCP48454 512 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 PITX1P78337 314 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 MRPS25P82663 173 aaKnown RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 NRG1Q02297 640 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 SEMA3BQ13214 749 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 SNX1Q13596 522 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 CASP8Q14790 479 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 CA9Q16790 459 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 SNX30Q5VWJ9 437 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 C4orf22Q6V702 233 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 PDZD4Q76G19 769 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 GSTA5Q7RTV2 222 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 HERC6Q8IVU3 1022 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 C7orf61Q8IZ16 206 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 EDEM1Q92611 657 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 EPAS1Q99814 870 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
SCLT1-209ENST00000511426 ASIC3Q9UHC3 531 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 TLR6Q9Y2C9 796 aa15.77■□□□□ 0.12
SCLT1-209ENST00000511426 A0A1W2PQH9 124 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 HACD1B0YJ81 288 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 FGF18O76093 207 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 C1RP00736 705 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 KLRC2P26717 231 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 RABGGTBP53611 331 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 EIF3EP60228 445 aaKnown RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 DYNLT1P63172 113 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 MMRN1Q13201 1228 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 GPS2Q13227 327 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 PLD1Q13393 1074 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 PQLC3Q8N755 202 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 TRMT2BQ96GJ1 504 aaKnown RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 MYRFLQ96LU7 910 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 LBHD1Q9BQE6 289 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 ZDHHC18Q9NUE0 388 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 GPATCH2LQ9NWQ4 482 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 DONSONQ9NYP3 566 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 CWC15Q9P013 229 aaKnown RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 CEP350Q5VT06 3117 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 BCLAF3A2AJT9 711 aaKnown RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 SLC38A8A6NNN8 435 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 NCAM2O15394 837 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 LILRB3O75022 631 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 KRT14P02533 472 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 RBP3P10745 1247 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 ALDH1A3P47895 512 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 UBE3AQ05086 875 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 IFRD2Q12894 506 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 VEPH1Q14D04 833 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 KLHDC10Q6PID8 442 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 RTL10Q7L3V2 364 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 CDKL3Q8IVW4 592 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 TTC9BQ8N6N2 239 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 RSAD2Q8WXG1 361 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 ART4Q93070 314 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 FERMT1Q9BQL6 677 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 BRD8Q9H0E9 1235 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 TKTL2Q9H0I9 626 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 NMUR1Q9HB89 426 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 GRHL1Q9NZI5 618 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 UXTQ9UBK9 157 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-209ENST00000511426 IRAK3Q9Y616 596 aa15.76■□□□□ 0.11
SCLT1-209ENST00000511426 EEF2KO00418 725 aaKnown RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 ATP2A2P16615 1042 aaKnown RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 ATF6P18850 670 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 ELF1P32519 619 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 SERPINB6P35237 376 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 TNNT3P45378 269 aaPredicted RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 GPR15P49685 360 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 TUBP50607 506 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 RING1Q06587 406 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 PAFAH1B3Q15102 231 aaKnown RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 RFX8Q6ZV50 586 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms