RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 KRT27Q7Z3Y8 459 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 B3GALNT2Q8NCR0 500 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 LSM14AQ8ND56 463 aaKnown RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 MYCBPAPQ8TBZ2 947 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 SSH3Q8TE77 659 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 UCMAQ8WVF2 138 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 LPIN2Q92539 896 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 PGBD1Q96JS3 809 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 PPP1R10Q96QC0 940 aaKnown RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 SYNPO2LQ9H987 977 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 POLG2Q9UHN1 485 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 HSF4Q9ULV5 492 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 PCDHB7Q9Y5E2 793 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 ADGRA2Q96PE1 1338 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 CYP3A7-CYP3A51PA0A087WV96 503 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 CCDC187A0A096LP49 1063 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 PRICKLE3O43900 615 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 PDHA1P08559 390 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 NR4A1P22736 598 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 CYP3A7P24462 503 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 ABCD3P28288 659 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 GALNT2Q10471 571 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 PTPRRQ15256 657 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 CYP1B1Q16678 543 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 P3H1Q32P28 736 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 KIAA0895LQ68EN5 471 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 C16orf89Q6UX73 402 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 PNPLA1Q8N8W4 532 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 ANKRD52Q8NB46 1076 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 FKBP10Q96AY3 582 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 TRMT61AQ96FX7 289 aaKnown RBP6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 RSRC1Q96IZ7 334 aaKnown RBP6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 VPS50Q96JG6 964 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 HERC2P3Q9BVR0 1158 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 ARHGAP39Q9C0H5 1083 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 KLC2Q9H0B6 622 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 ACAD9Q9H845 621 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 NSMCE4AQ9NXX6 385 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 CD207Q9UJ71 328 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 RCE1Q9Y256 329 aa6.06□□□□□ -1.44
HMGB1P47-201ENST00000511281 DYTNA2CJ06 578 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 C3orf70A6NLC5 250 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TMPRSS11DO60235 418 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ZBED4O75132 1171 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 GUCY1B2O75343 617 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 NXPH3O95157 252 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 SPDEFO95238 335 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 NDUFA10O95299 355 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 C8AP07357 584 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 MATN1P21941 496 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 PGM1P36871 562 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 SELENOPP49908 381 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 CBFBQ13951 182 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 R3HDM1Q15032 1099 aaKnown RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 GPR68Q15743 365 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TSTQ16762 297 aaKnown RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 SLC45A4Q5BKX6 768 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TREML2Q5T2D2 321 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 MTHFD1LQ6UB35 978 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TMTC3Q6ZXV5 915 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 H1FNTQ75WM6 255 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TTC9BQ8N6N2 239 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ANKRD44Q8N8A2 993 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 LINS1Q8NG48 757 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 OR52L2PQ8NGH6 319 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 RP9Q8TA86 221 aaKnown RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ZCCHC10Q8TBK6 192 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ERP27Q96DN0 273 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ADOQ96SZ5 270 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 TAOK3Q9H2K8 898 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 CDCP1Q9H5V8 836 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 IL21RQ9HBE5 538 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 SLC22A11Q9NSA0 550 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 KLC4Q9NSK0 619 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 EHD3Q9NZN3 535 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 CEP72Q9P209 647 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 ORC3Q9UBD5 711 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 CNPY2Q9Y2B0 182 aa6.05□□□□□ -1.44
HMGB1P47-201ENST00000511281 GOLGA6L10A0A0M3HER8 536 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PI4KAP2A4QPH2 592 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 DBX1A6NMT0 343 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 DHX16O60231 1041 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 TULP3O75386 442 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 SCGB1D1O95968 90 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PEX11BO96011 259 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 ACP5P13686 325 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 BMP7P18075 431 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 LAG3P18627 525 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PSMA4P25789 261 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PCSK6P29122 969 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 GPD2P43304 727 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PCP4P48539 62 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 RCAN1P53805 252 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 SUMO2P61956 95 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 CAMK1Q14012 370 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 ERV3-1Q14264 604 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 MEA1Q16626 185 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 XP32Q5T750 250 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PTCHD4Q6ZW05 846 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms