RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	ATF6	P18850	670 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	DDX6	P26196	483 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	WEE1	P30291	646 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	BCAT1	P54687	386 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	POLR2F	P61218	127 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	LRRC32	Q14392	662 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	ARHGAP44	Q17R89	818 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF677	Q86XU0	584 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	CHCHD4	Q8N4Q1	142 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	TTC9B	Q8N6N2	239 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	STK32A	Q8WU08	396 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF606	Q8WXB4	792 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	IRF7	Q92985	503 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	CRELD1	Q96HD1	420 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	SPAG5	Q96R06	1193 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	SMO	Q99835	787 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	TRMT61B	Q9BVS5	477 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	NUCKS1	Q9H1E3	243 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	GAN	Q9H2C0	597 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	RAX	Q9Y2V3	346 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	MRPS23	Q9Y3D9	190 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	TEP1	Q99973	2627 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	COL6A6	A6NMZ7	2263 aa		10.81	□□□□□ -0.68
PTPN20-222	ENST00000509774	CCDC163	A0A0D9SF12	145 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	BCLAF3	A2AJT9	711 aa	Known RBP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	TNFRSF10B	O14763	440 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	XPO1	O14980	1071 aa	Known RBP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	CCDC130	P13994	396 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SNRPB	P14678	240 aa	Known RBP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	CEBPB	P17676	345 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	YWHAQ	P27348	245 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	GDI1	P31150	447 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	USP8	P40818	1118 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	STAT1	P42224	750 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	PDE6C	P51160	858 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	JAM2	P57087	298 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SNX16	P57768	344 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SIM1	P81133	766 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	CREB5	Q02930	508 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	BST2	Q10589	180 aa	Known RBP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	RAPGEF1	Q13905	1077 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	UAP1L1	Q3KQV9	507 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	ARHGAP15	Q53QZ3	475 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	PRSS36	Q5K4E3	855 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SNX30	Q5VWJ9	437 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	GJB7	Q6PEY0	223 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SARM1	Q6SZW1	724 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	CLEC20A	Q6ZU45	233 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF605	Q86T29	641 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	RETREG3	Q86VR2	466 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SCML4	Q8N228	414 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	ZNF276	Q8N554	614 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	PDZD8	Q8NEN9	1154 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	GIPC2	Q8TF65	315 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	KCTD13	Q8WZ19	329 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	E2F7	Q96AV8	911 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	HSFY1	Q96LI6	401 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	SLITRK1	Q96PX8	696 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	GCNA	Q96QF7	691 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	KCNK16	Q96T55	309 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	LPIN3	Q9BQK8	851 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	LHX5	Q9H2C1	402 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	CYLD	Q9NQC7	956 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	KRT82	Q9NSB4	513 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM49B	Q9NUQ9	324 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	TSPAN16	Q9UKR8	245 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	PCDHGC3	Q9UN70	934 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	FHOD1	Q9Y613	1164 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	NCAN	O14594	1321 aa		10.8	□□□□□ -0.68
PTPN20-222	ENST00000509774	TSC2	P49815	1807 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	MYO16	Q9Y6X6	1858 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774		A0A1W2PQJ5	194 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774		F8VZ95	297 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	ARNTL	O00327	626 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	CYP26A1	O43174	497 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	SOAT2	O75908	522 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	F11	P03951	625 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	ADORA2B	P29275	332 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	GNA15	P30679	374 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	KRT9	P35527	623 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	SOX5	P35711	763 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	PBX1	P40424	430 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	ACADSB	P45954	432 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	PLA2G4A	P47712	749 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	KIF11	P52732	1056 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	MAP3K7CL	P57077	242 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	APBA1	Q02410	837 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	ORC1	Q13415	861 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	CCDC142	Q17RM4	750 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	RAB41	Q5JT25	222 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	FAM78A	Q5JUQ0	283 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	PKN3	Q6P5Z2	889 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	VIT	Q6UXI7	678 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	TMC8	Q8IU68	726 aa		10.79	□□□□□ -0.68
PTPN20-222	ENST00000509774	RNF214	Q8ND24	703 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms