RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	NOMO1	Q15155	1222 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	NCBP2-AS2	Q69YL0	99 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	EMB	Q6PCB8	327 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	VSTM1	Q6UX27	236 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	ANKS3	Q6ZW76	656 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	HDX	Q7Z353	690 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	UNC45B	Q8IWX7	931 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	TP53INP2	Q8IXH6	220 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	NUP93	Q8N1F7	819 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	CCDC33	Q8N5R6	958 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	EIF1AD	Q8N9N8	165 aa	Known RBP	10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	FBXO22	Q8NEZ5	403 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	FBXO25	Q8TCJ0	367 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	GIPC2	Q8TF65	315 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	AUTS2	Q8WXX7	1259 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	CASP10	Q92851	521 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	ART4	Q93070	314 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	CSPG4P5	Q96PW8	444 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	CLSTN3	Q9BQT9	956 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	ZNF670	Q9BS34	389 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	TMEM121	Q9BTD3	319 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	RAB17	Q9H0T7	212 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	EPB41L4B	Q9H329	900 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	LRRC4C	Q9HCJ2	640 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	AAAS	Q9NRG9	546 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	GMIP	Q9P107	970 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	SFMBT1	Q9UHJ3	866 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	FBXW11	Q9UKB1	542 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	STAP1	Q9ULZ2	295 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	BACE2	Q9Y5Z0	518 aa		10.5	□□□□□ -0.73
FBXO38-215	ENST00000509411	FAM92A	A1XBS5	289 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411		H7C4K7	107 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	APOC4-APOC2	K7ER74	178 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	C2CD2L	O14523	706 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	MSI1	O43347	362 aa	Known RBP	10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	APOC2	P02655	101 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	SOD2	P04179	222 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	OR1D2	P34982	312 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	ADRA1B	P35368	520 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	ALDH7A1	P49419	539 aa	Known RBP	10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	CXCR3	P49682	368 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	EIF3E	P60228	445 aa	Known RBP	10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	SEMA3B	Q13214	749 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	NNT	Q13423	1086 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	PPP1R7	Q15435	360 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	PSMD5	Q16401	504 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	USP41	Q3LFD5	358 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	MGAT5B	Q3V5L5	792 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	MAP9	Q49MG5	647 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	ODF2	Q5BJF6	829 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	SPOUT1	Q5T280	376 aa	Known RBP	10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	RASIP1	Q5U651	963 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	SLC8B1	Q6J4K2	584 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	MREG	Q8N565	214 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	NTAN1	Q96AB6	310 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	ZNF558	Q96NG5	402 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	NCAPG	Q9BPX3	1015 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	ADAM7	Q9H2U9	754 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	FAM204A	Q9H8W3	233 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	HOMER3	Q9NSC5	361 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	DDIT4	Q9NX09	232 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	RASAL2	Q9UJF2	1139 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	SCML2	Q9UQR0	700 aa		10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	LAMA2	P24043	3122 aa	Known RBP	10.49	□□□□□ -0.73
FBXO38-215	ENST00000509411	LCHN	A4D1U4	455 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SLC38A8	A6NNN8	435 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ZNF487	B1APH4	448 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	DLL1	O00548	723 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	APOL1	O14791	398 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	TRIM66	O15016	1216 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	IRAK2	O43187	625 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	BAIAP3	O94812	1187 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ITGAV	P06756	1048 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	RPL22	P35268	128 aa	Known RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ITGA8	P53708	1063 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	HTRA4	P83105	476 aa	Predicted RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	DSG1	Q02413	1049 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SCAP	Q12770	1279 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	TMEM240	Q5SV17	173 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	BTBD8	Q5XKL5	378 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	BEND5	Q7L4P6	421 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SPRED2	Q7Z698	418 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	VSIG1	Q86XK7	387 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SPPL2B	Q8TCT7	592 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SLC9A7	Q96T83	725 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	SEPT5	Q99719	369 aa	Predicted RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	MAK16	Q9BXY0	300 aa	Known RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	USP29	Q9HBJ7	922 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ARHGEF4	Q9NR80	690 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	WHRN	Q9P202	907 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ASIC3	Q9UHC3	531 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	XPO7	Q9UIA9	1087 aa	Known RBP	10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	ZNF148	Q9UQR1	794 aa		10.48	□□□□□ -0.73
FBXO38-215	ENST00000509411	TCRBV7S3A2	A0A539	114 aa		10.47	□□□□□ -0.73
FBXO38-215	ENST00000509411	ZBBX	A8MT70	800 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms