RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 CEP63Q96MT8 703 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 TMEM74BQ9NUR3 256 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 WDR35Q9P2L0 1181 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 PILRBQ9UKJ0 227 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 ZMIZ1Q9ULJ6 1067 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 TP53BP1Q12888 1972 aaPredicted RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 PCDH15Q96QU1 1955 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 CACNA1EQ15878 2313 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 KNL1Q8NG31 2342 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 PKD1L2Q7Z442 2459 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 PCNX2A6NKB5 2137 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 YJEFN3A6XGL0 299 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 UPK3BL1B0FP48 263 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 UPK3BL2E5RIL1 263 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 E7ENQ6 273 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 PSMA7O14818 248 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CACNG3O60359 315 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 STX10O60499 249 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 ZNF217O75362 1048 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 TYRP14679 529 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CD19P15391 556 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 GABRG2P18507 467 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 SPINK2P20155 84 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 BRD2P25440 801 aaKnown RBP11.43□□□□□ -0.58
RNF4-212ENST00000509258 NTSR1P30989 418 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 PSEN1P49768 467 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 RGS7P49802 495 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
RNF4-212ENST00000509258 GFPT1Q06210 699 aaPredicted RBP11.43□□□□□ -0.58
RNF4-212ENST00000509258 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 KIAA1211LQ6NV74 962 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 RRAGAQ7L523 313 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 TRIM59Q8IWR1 403 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CHPFQ8IZ52 775 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 TTC39CQ8N584 583 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CLEC4CQ8WTT0 213 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CDK5RAP1Q96SZ6 601 aaKnown RBP11.43□□□□□ -0.58
RNF4-212ENST00000509258 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 BBS2Q9BXC9 721 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
RNF4-212ENST00000509258 SLC6A17Q9H1V8 727 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 CLIC5Q9NZA1 410 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 ATRXP46100 2492 aa11.43□□□□□ -0.58
RNF4-212ENST00000509258 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 WASH3PC4AMC7 463 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 XPO1O14980 1071 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 SERPINF2P08697 491 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 RALAP11233 206 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 CORO1AP31146 461 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 ZNF132P52740 706 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 BCAT1P54687 386 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 SIM1P81133 766 aaPredicted RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 SEMA3BQ13214 749 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 CAMK4Q16566 473 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 DUOXA1Q1HG43 343 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 FYB2Q5VWT5 728 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 PMF1Q6P1K2 205 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 TMEM270Q6UE05 265 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 PIP4P1Q86T03 277 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 IRF2BP1Q8IU81 584 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 ZNF276Q8N554 614 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 EDEM1Q92611 657 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 GATA6Q92908 595 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 GTPBP2Q9BX10 602 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 SRRTQ9BXP5 876 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 ACP6Q9NPH0 428 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 SFMBT1Q9UHJ3 866 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 FBXO10Q9UK96 956 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 AJAP1Q9UKB5 411 aaPredicted RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 AGO1Q9UL18 857 aaKnown RBP11.42□□□□□ -0.58
RNF4-212ENST00000509258 SLC6A14Q9UN76 642 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 ZNF510Q9Y2H8 683 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 NEUROG3Q9Y4Z2 214 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 RAD54BQ9Y620 910 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 DOCK9Q9BZ29 2069 aa11.42□□□□□ -0.58
RNF4-212ENST00000509258 SPEGQ15772 3267 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 TMEM131Q92545 1883 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 IGHV1OR15-9A0A0B4J2B8 117 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 SLC12A8A0AV02 714 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 PMM2O15305 246 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 OPHN1O60890 802 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 TOP3BO95985 862 aaKnown RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 ZBED1O96006 694 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms