RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PSMC5P62195 406 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 GABREP78334 506 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 PPP2R5CQ13362 524 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 EPHA7Q15375 998 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 LONRF3Q496Y0 759 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 XKR3Q5GH77 459 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 FAM102BQ5T8I3 360 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 MOXD1Q6UVY6 613 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 TSHZ1Q6ZSZ6 1077 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 C4orf32Q8N8J7 132 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 ANKRD53Q8N9V6 530 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 RNF169Q8NCN4 708 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 RDM1Q8NG50 284 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 PIGOQ8TEQ8 1089 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 GDPD5Q8WTR4 605 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 PRPF31Q8WWY3 499 aaKnown RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 TMEM143Q96AN5 459 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 FAM167AQ96KS9 214 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 CEP170P1Q96L14 293 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 SCLT1Q96NL6 688 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 MTMR9Q96QG7 549 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 YME1L1Q96TA2 773 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 ADAM2Q99965 735 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 ERVK-5Q9HDB9 667 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 SUCLA2Q9P2R7 463 aaPredicted RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 INSL6Q9Y581 213 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 PCDHA9Q9Y5H5 950 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 IGSF9BQ9UPX0 1349 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 VCANP13611 3396 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 C5orf42Q9H799 3197 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 EVPLQ92817 2033 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 A0A087WZ62 844 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 UBE2QL1A1L167 161 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 DENND3A2RUS2 1198 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 H3BQV1 296 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 MASP2O00187 686 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 TBX3O15119 743 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 KLF4O43474 513 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 EFCAB14O75071 495 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 ABHD16AO95870 558 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 TMOD1P28289 359 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 YWHABP31946 246 aaKnown RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 ERVK-21P61565 698 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 HMGN5P82970 282 aaKnown RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 HTRA4P83105 476 aaPredicted RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 ACAP1Q15027 740 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 IL17AQ16552 155 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 XKR9Q5GH70 373 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 TTC38Q5R3I4 469 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 FKBP15Q5T1M5 1219 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 FAM228AQ86W67 206 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 RHPN2Q8IUC4 686 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 VRK3Q8IV63 474 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 NOSTRINQ8IVI9 506 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 LINC01465Q8N7H1 131 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 ATXN2LQ8WWM7 1075 aaKnown RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 APBB2Q92870 758 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 ZNF764Q96H86 408 aaPredicted RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 TGS1Q96RS0 853 aaKnown RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 MAP7D2Q96T17 732 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 MNTQ99583 582 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 NAP1L4Q99733 375 aaKnown RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 HSD17B14Q9BPX1 270 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 FDXACB1Q9BRP7 624 aaPredicted RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 LXNQ9BS40 222 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 FOXP1Q9H334 677 aaPredicted RBP5.03□□□□□ -1.6
NUP54-206ENST00000508465 ZSWIM4Q9H7M6 989 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 SMC3Q9UQE7 1217 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 PCDHB6Q9Y5E3 794 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 MTCH2Q9Y6C9 303 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 COL1A2P08123 1366 aa5.03□□□□□ -1.6
NUP54-206ENST00000508465 IGKV6-21A0A0C4DH24 114 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 PP2D1A8MPX8 630 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 LPXNO60711 386 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 MED24O75448 989 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 IPO13O94829 963 aaKnown RBP5.02□□□□□ -1.61
NUP54-206ENST00000508465 ITGB1P05556 798 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 DARSP14868 501 aaKnown RBP5.02□□□□□ -1.61
NUP54-206ENST00000508465 U2AF2P26368 475 aaKnown RBP eCLIP5.02□□□□□ -1.61
NUP54-206ENST00000508465 CDC25AP30304 524 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 SDHAP31040 664 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 GPC3P51654 580 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 POLGP54098 1239 aaPredicted RBP5.02□□□□□ -1.61
NUP54-206ENST00000508465 FAM189BP81408 668 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 TFF2Q03403 129 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 LAMTOR4Q0VGL1 99 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 GPM6BQ13491 265 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 BTG3Q14201 252 aaPredicted RBP5.02□□□□□ -1.61
NUP54-206ENST00000508465 ZRSR1Q15695 479 aaKnown RBP5.02□□□□□ -1.61
NUP54-206ENST00000508465 EPC2Q52LR7 807 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 SYCE2Q6PIF2 218 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 CATSPER3Q86XQ3 398 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 C4orf19Q8IY42 314 aa5.02□□□□□ -1.61
NUP54-206ENST00000508465 BCL6BQ8N143 479 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms