RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 JPH3Q8WXH2 748 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SMG7Q92540 1137 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 MARC2Q969Z3 335 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 C12orf43Q96C57 262 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM89AQ96GI7 184 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ZKSCAN3Q9BRR0 538 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CINPQ9BW66 212 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 EPS8L2Q9H6S3 715 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM105AQ9NUU6 356 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SMARCAL1Q9NZC9 954 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PARP2Q9UGN5 583 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 LGALS13Q9UHV8 139 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TINAGQ9UJW2 476 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 EDARQ9UNE0 448 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PLA2G4CQ9UP65 541 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ABCC1P33527 1531 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 DBTP11182 482 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 IMPDH1P20839 514 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CDC25AP30304 524 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 NMT1P30419 496 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF76P36508 570 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 MYL6P60660 151 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ESRRGP62508 458 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ACY1Q03154 408 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CENPCQ03188 943 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 DLG2Q15700 870 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 MACC1Q6ZN28 852 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 RTL10Q7L3V2 364 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CCDC84Q86UT8 332 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 HERC6Q8IVU3 1022 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PALM2Q8IXS6 379 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 RASGEF1CQ8N431 466 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 LIX1Q8N485 282 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TSPAN14Q8NG11 270 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SSH3Q8TE77 659 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 GDPD5Q8WTR4 605 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 C7orf43Q8WVR3 580 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 MS4A14Q96JA4 679 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SPACA7Q96KW9 195 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TBCBQ99426 244 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 DHX33Q9H6R0 707 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 BCAP29Q9UHQ4 241 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PCDHB12Q9Y5F1 795 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SNX5Q9Y5X3 404 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SSU72P8A0A1W2PR75 194 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC22A2O15244 555 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SSX5O60225 188 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 DTNBO60941 627 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 OR7A10O76100 309 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 ARIH2O95376 493 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 CYP17A1P05093 508 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SRGNP10124 158 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 CDH1P12830 882 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 ITGB6P18564 788 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 CXCR5P32302 372 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 GUCY1A2P33402 732 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 HK2P52789 917 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 STX17P56962 302 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 NLRP11P59045 1033 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 KLRC3Q07444 240 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 CEP55Q53EZ4 464 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 TTC39AQ5SRH9 613 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 ARHGEF16Q5VV41 709 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 KSR2Q6VAB6 950 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 PLEKHG7Q6ZR37 379 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 BEND7Q8N7W2 519 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 IPCEF1Q8WWN9 437 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 HEXIM2Q96MH2 286 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 BBS4Q96RK4 519 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 NCOR1P1Q9H4R4 102 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 MLXIPQ9HAP2 919 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms