RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 TM7SF3Q9NS93 570 aa11.83□□□□□ -0.52
CAST-221ENST00000508197 WSB2Q9NYS7 404 aaPredicted RBP11.83□□□□□ -0.52
CAST-221ENST00000508197 RBAKQ9NYW8 714 aaPredicted RBP11.83□□□□□ -0.52
CAST-221ENST00000508197 TBC1D7Q9P0N9 293 aa11.83□□□□□ -0.52
CAST-221ENST00000508197 SUSD2Q9UGT4 822 aa11.83□□□□□ -0.52
CAST-221ENST00000508197 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 A0A1B0GTW7 788 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 NDUFS2O75306 463 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 TBCAO75347 108 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 GNSP15586 552 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 ANXA13P27216 316 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 CD6P30203 668 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 ABCD1P33897 745 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 UBA7P41226 1012 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 HLA-BQ31612 363 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 WDR45BQ5MNZ6 344 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 SYCP2LQ5T4T6 812 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 BTBD8Q5XKL5 378 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 USP49Q70CQ1 688 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 DDX42Q86XP3 938 aaKnown RBP eCLIP11.82□□□□□ -0.52
CAST-221ENST00000508197 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 TPCN2Q8NHX9 752 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 SCAMP5Q8TAC9 235 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 LARP4BQ92615 738 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 TOE1Q96GM8 510 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 DUSP9Q99956 384 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 GPR174Q9BXC1 333 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 B3GNT5Q9BYG0 378 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 ZDHHC5Q9C0B5 715 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 MKRN2Q9H000 416 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 DPEP3Q9H4B8 488 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 PCIF1Q9H4Z3 704 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 ITM2CQ9NQX7 267 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 INTS13Q9NVM9 706 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 IL37Q9NZH6 218 aa11.82□□□□□ -0.52
CAST-221ENST00000508197 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
CAST-221ENST00000508197 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 SLC26A4O43511 780 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 THBS1P07996 1170 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 ZNF883P0CG24 379 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 PTPN1P18031 435 aaKnown RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 YWHAQP27348 245 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 GNL1P36915 607 aaPredicted RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 CLDN10P78369 228 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 L1TD1Q5T7N2 865 aaKnown RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 ZNF385CQ66K41 422 aaPredicted RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 MCTP1Q6DN14 999 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 GRAMD4Q6IC98 578 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 PAQR9Q6ZVX9 377 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 NUP93Q8N1F7 819 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 DNAJC19Q96DA6 116 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 SLITRK1Q96PX8 696 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 UBL7Q96S82 380 aaPredicted RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 MIR1-1HGQ9H1L0 117 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 DNAJC17Q9NVM6 304 aaKnown RBP11.81□□□□□ -0.52
CAST-221ENST00000508197 EHD2Q9NZN4 543 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
CAST-221ENST00000508197 KCNK3O14649 394 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 BCAT2O15382 392 aaPredicted RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 CACNG3O60359 315 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 TBX18O95935 607 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 NCAM1P13591 858 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 PLA2G2AP14555 144 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 TYRP14679 529 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 GARTP22102 1010 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 SMAD1Q15797 465 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 FUT11Q495W5 492 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 DCAF12L1Q5VU92 463 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 SDE2Q6IQ49 451 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 KIAA1324Q6UXG2 1013 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 TPGS1Q6ZTW0 290 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 HTR3DQ70Z44 454 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 CADM4Q8NFZ8 388 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 PIP4K2CQ8TBX8 421 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 KIF2CQ99661 725 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 PRORYQ9H606 182 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 MRPL44Q9H9J2 332 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 SCHIP1Q9P0W5 487 aaPredicted RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 EIF2B4Q9UI10 523 aaKnown RBP11.8□□□□□ -0.52
CAST-221ENST00000508197 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAST-221ENST00000508197 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 USP3Q9Y6I4 520 aa11.8□□□□□ -0.52
CAST-221ENST00000508197 A0A1B0GVT2 93 aa11.79□□□□□ -0.52
CAST-221ENST00000508197 FAM92AA1XBS5 289 aa11.79□□□□□ -0.52
CAST-221ENST00000508197 NEDD8-MDP1E9PL57 170 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms