RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PIH1D1Q9NWS0 290 aaKnown RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 PPP2R2CQ9Y2T4 447 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 NPHP3-ACAD11A0A0J9YXS1 232 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 A0A1B0GVC2 190 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 A0A1W2PQC6 194 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 KCNJ18B7U540 433 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 AURKAO14965 403 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 N4BP3O15049 544 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 USO1O60763 962 aaKnown RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 GCNT3O95395 438 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 PIGRP01833 764 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 GJB1P08034 283 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 CYBAP13498 195 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 ATF7P17544 494 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 EN2P19622 333 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 GRK3P35626 688 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 MRPL28Q13084 256 aaKnown RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 KCNJ12Q14500 433 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 HSDL1Q3SXM5 330 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 SYT10Q6XYQ8 523 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 PDZD4Q76G19 769 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 ZMAT3Q9HA38 289 aaKnown RBP7.51□□□□□ -1.21
CLCN3-206ENST00000507875 GABRQQ9UN88 632 aa7.51□□□□□ -1.21
CLCN3-206ENST00000507875 GOLGA6L9A6NEM1 432 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 DYNC1LI2O43237 492 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 PPFIA2O75334 1257 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC159P0C7I6 412 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NEFHP12036 1026 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CCL5P13501 91 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CYP2B6P20813 491 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CST5P28325 142 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 COPB1P53618 953 aaKnown RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 PHC1P78364 1004 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 MAN2A1Q16706 1144 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NUGGCQ68CJ6 796 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 TRIM65Q6PJ69 517 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 BTN2A1Q7KYR7 527 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 HAUS6Q7Z4H7 955 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 GALNT5Q7Z7M9 940 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 RTN4RL1Q86UN2 441 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NAXEQ8NCW5 288 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 ATP6V1E2Q96A05 226 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NACC2Q96BF6 587 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NUP58Q9BVL2 599 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 BOCQ9BWV1 1114 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NACA2Q9H009 215 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 KIAA1586Q9HCI6 787 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 C6orf203Q9P0P8 240 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 C2CD2Q9Y426 696 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CENPFP49454 3210 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 EVPLQ92817 2033 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 TRIM49BA6NDI0 452 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 FAM187AA6NFU0 413 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 RSPH10B2B2RC85 870 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 K7ENM7 598 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SEPT4O43236 478 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 HMGCRP04035 888 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 RSPH10BP0C881 870 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 GNAT1P11488 350 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 TMOD1P28289 359 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NCBP1Q09161 790 aaKnown RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 TUSC3Q13454 348 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 FAM47CQ5HY64 1035 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 PITRM1Q5JRX3 1037 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 DAAM2Q86T65 1068 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 IRF2BP1Q8IU81 584 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CNGA4Q8IV77 575 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 AFG1LQ8WV93 481 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 RAB24Q969Q5 203 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC51Q96ER9 411 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 RBM18Q96H35 190 aaKnown RBP7.5□□□□□ -1.21
CLCN3-206ENST00000507875 C16orf70Q9BSU1 422 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 EDEM3Q9BZQ6 932 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 VPS16Q9H269 839 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 POFUT1Q9H488 388 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 XPNPEP1Q9NQW7 623 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 DMAC2Q9NW81 257 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 FLRT1Q9NZU1 646 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SNX13Q9Y5W8 968 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 NR2E3Q9Y5X4 410 aa7.5□□□□□ -1.21
CLCN3-206ENST00000507875 SCN10AQ9Y5Y9 1956 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 POM121BA6NF01 834 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 LRRC14BA6NHZ5 514 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 HAS3O00219 553 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 WNT9AO14904 365 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 MFAP3LO75121 409 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 GYPCP04921 128 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms