RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 C3orf38Q5JPI3 329 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 ZNF549Q6P9A3 640 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 C1orf228Q6PIY5 440 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 SMRP1Q8NCR6 262 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 TIFAQ96CG3 184 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 HIPK2Q9H2X6 1198 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 PTPRHQ9HD43 1115 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 MLXIPLQ9NP71 852 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 MAP3K20Q9NYL2 800 aaKnown RBP5.43□□□□□ -1.54
LINC01088-203ENST00000507476 SEMA5BQ9P283 1151 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 DKK4Q9UBT3 224 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 AFF4Q9UHB7 1163 aaKnown RBP5.43□□□□□ -1.54
LINC01088-203ENST00000507476 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
LINC01088-203ENST00000507476 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
LINC01088-203ENST00000507476 RAB27BO00194 218 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 INPPL1O15357 1258 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 PRPF3O43395 683 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 BRAFP15056 766 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 CD19P15391 556 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 ACVR2AP27037 513 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 CPT1AP50416 773 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 RPS16P62249 146 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 CHAF1AQ13111 956 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 SLC29A2Q14542 456 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 PFKFB3Q16875 520 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 EARS2Q5JPH6 523 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 UBAP2Q5T6F2 1119 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 ZNF280DQ6N043 979 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 RBMXL3Q8N7X1 1067 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 NGDNQ8NEJ9 315 aaKnown RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 HERPUD2Q9BSE4 406 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 SCNM1Q9BWG6 230 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 SEMA4BQ9NPR2 832 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-203ENST00000507476 COL20A1Q9P218 1284 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 VPS51Q9UID3 782 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 L1RE1Q9UN81 338 aa5.42□□□□□ -1.54
LINC01088-203ENST00000507476 ANO9A1A5B4 782 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 CFAP69A5D8W1 941 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 C2CD4BA6NLJ0 364 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 ISM1B1AKI9 464 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 FAM227AF5H4B4 570 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 FRS3O43559 492 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 CA12O43570 354 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 MBPP02686 304 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-203ENST00000507476 TXNP10599 105 aaKnown RBP5.41□□□□□ -1.54
LINC01088-203ENST00000507476 B4GALNT1Q00973 533 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 CNGA2Q16280 664 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 ST3GAL2Q16842 350 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 FAM110CQ1W6H9 321 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 SLC4A8Q2Y0W8 1093 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 DAB2IPQ5VWQ8 1189 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 CCDC174Q6PII3 467 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 ZNF793Q6ZN11 406 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 CHST8Q9H2A9 424 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 AS3MTQ9HBK9 375 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 AGO4Q9HCK5 861 aaKnown RBP5.41□□□□□ -1.54
LINC01088-203ENST00000507476 PLCB1Q9NQ66 1216 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 RGS17Q9UGC6 210 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-203ENST00000507476 SLC27A6Q9Y2P4 619 aa5.41□□□□□ -1.54
LINC01088-203ENST00000507476 AQP7P3A6NL99 342 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 C16orf96A6NNT2 1141 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 CCER2I3L3R5 266 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 ZNF500O60304 480 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 PLAUP00749 431 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 CASP2P42575 452 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 HTR3AP46098 478 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 COPAP53621 1224 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 EIF4A1P60842 406 aaKnown RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 TXNL4AP83876 142 aaKnown RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 KCNAB1Q14722 419 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 FAM83BQ5T0W9 1011 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 LVRNQ6Q4G3 990 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 CLEC9AQ6UXN8 241 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 DLK2Q6UY11 383 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 TFAP2DQ7Z6R9 452 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 MYLK4Q86YV6 388 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 PRR11Q96HE9 360 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 ZNF668Q96K58 619 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 HIST1H2AAQ96QV6 131 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 STRBPQ96SI9 672 aaKnown RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 NUAK2Q9H093 628 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 FAM83DQ9H4H8 585 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 MLXIPQ9HAP2 919 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 NLRC4Q9NPP4 1024 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 TPCN1Q9ULQ1 816 aa5.4□□□□□ -1.54
LINC01088-203ENST00000507476 SIRT4Q9Y6E7 314 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-203ENST00000507476 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 A6NNZ2 444 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 ZKSCAN1P17029 563 aaPredicted RBP5.39□□□□□ -1.55
LINC01088-203ENST00000507476 TPH1P17752 444 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 HTR7P34969 479 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 HALP42357 657 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 CDKN2AP42771 156 aaKnown RBP5.39□□□□□ -1.55
LINC01088-203ENST00000507476 FMO1Q01740 532 aa5.39□□□□□ -1.55
LINC01088-203ENST00000507476 PLAG1Q6DJT9 500 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms